| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_45980 |
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| Symbol | |
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| ID | 4838390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | - |
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| Start bp | 1592320 |
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| End bp | 1595862 |
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| Gene Length | 3543 bp |
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| Protein Length | 1180 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640389705 |
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| Product | predicted protein |
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| Protein accession | XP_001384609 |
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| Protein GI | 150865406 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
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| TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00372447 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0355887 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCGCT ACAAAAACCC CAAGTCTCCG GCTAAGTTGA AACAGCAGAT CGTACTTCCC
ACCTGTAAAC TCGACTCCAA CTTGGTTTTG TTGCCAGGGA TTATATACAA CGTTACGTTT
TCTCGTTTCA AAGCTGCTGC GTTGTTGTAC CGTTACAAGG ATCTTGTATC GCAAGTCTCA
ATAATAAACA ACTTGCTCAA CGAATATGAG TTCAATCCGT CTAAAGATTC GGACTCAGTT
GAAGAAGACG ATATGGTCAC AAGTCCTATC ACTATCTCAA AGGTCGCTGT GGAAGGTATT
GAACAGTTTT TCAAATACGA AGCAGCATTC AAGAACAGCC AGGGCTTAGT TTCGGAAAAG
GATATTGCTG AAGTTGCACC CTCCAACGAG TTTGACTGGT TGACCCTTGC TATCAAGCCC
AATTTGGAAA AGATCAAAGA GCCTAGTAAT GCTCAAATTG ATCCAACTGA ACACAACAGT
GTGGTCACTA TAGCCAGAAT CGTAGGAATC GTAGACGACA CCACCAACAT CAAGTTGACG
TTGCAGGCTA TAACCAGAGG ATTGAAGATT GCACCCAAGA AGAAAACAAG GCCAAACGAA
CAACTCTTAG AAGTTGACTG GAGCTCAGAC ATCCCCGAGT TGAGGCGCCA TTTTAAGTCT
TTGAAGGATA GCAGTCTCGA TTTGTTCAAG GTAATCGACA AATTTATTGT AGACTATCGT
CAAGCTTTGA GCATCAACTC TGCCAATGGA AACAAGTCAA ACCTCCAGAT AACTAAACCG
GGATCAAGAT ATAAAGGAGC CAATGGATCC AGCCAGAAAC CTGGTGATTT GCTTACGTTG
AATCCTTTGG CCAATGCTTT GTATCTCCAG TTGGCTGGTT CGAAGGATTT CTCCAAGGCA
TTTCTTAGTT TGCAGAAGTT ATATGGCCAG TTTGCTTCTG ATGAAAACTT GAAGGTTGAC
ACGAAGTCAT ATTTGAGACT ACTTGATTTG ACTTGTGGAA TCTTGCCATT TCCCAACCAC
GAGAAGTTGA AATTGCTCCA TAAAATTAGC ATTGATGACA GAGGCAATGA GTTGATCAAC
ATGATAAACC AGCTAATCAA GATCTTTGAC ACTTTGGATG GTAACAACTC GTTTGTGAAC
CATTGGTTCT ATAACGAAGC AACCAATATC CAGAAAGCCA ATGTCGTAGC CAACCAGCTC
AAATCTATCA GGTTGCTCTT AGAAGGAATG ACGAATAAGA CCAGACCAAT CAGCAACAGA
GGCAATATCA AATCGTTCAA CAACAGTGAA AATGGCAATA ACAATAAAAC TAATGGTTCT
GGAATCACAA GTCGTCGTCC TAAGTCAAAT GAGGATGGAG GAGAAGTCTA TGATGAAGAA
GATGATGATG AAGAAGATGA TGAGTTAAGA GCCATCACTA ACTTCATCAA GTACAAGTTG
CCAAATATCA CGACTTTAAG TCCTGACTCC AAGAGATTGA TTATCAAGGA TTTCAAAAGA
ATTAGAGCCT CTTCACAATC TCCTGGAGGA GGTGGTAACT CTGATTTCCA CGTGATTAGA
AACTATTTGG AGATCGTCAT GGATATTCCT TGGGACAAGT ACGTCACTAA GTTCAAGTCC
AACAAAGATA TTGACTTGAA CTTTGCCAAG AAACAGTTGG ACGATGACCA CTACGGTTTG
GAACATGTCA AGAAGAGATT GATTCAGTAC TTGGTTGTGT TGAAGCTTTT AGGAATTAAC
GCGGAAAAGC AGATTAGCGA TTTCAGGAAA GAAAATCAAG TTCCTCTGCC TTCTTCTAGT
GGACTGAATC TAGCCACTCA AAATAGTCTT GTGCCAGCTT CTTCTATTGT GATTGCCAAC
AACGACGAAA CCTCATTTGC TCACAAACAA GCACAGAACA AGGTAAAGAC TTCGATCAAG
GAAAGCAATA TAGAAAATCA AACCAACCAG TCGATTCAAG TTACCAAATA CAACAAGTCG
CCTATTATAA TGTTGGCTGG GCCACCTGGT ACAGGTAAGA CTTCGTTGGC CAAATCTATT
GCCAGTTCTT TAGGAAGAAA CTTCCAGAGG ATCTCGTTGG GTGGTGTCAA GGACGAGAGC
GAGATCAGAG GTCATAGAAG AACCTATGTA GGAGCCATGC CTGGTTTGAT TATCCAAGCT
TTGAGAAAAT CTAGATCAAT GAACCCAGTG ATTTTACTTG ATGAAATCGA CAAAGTCATT
GGTGGAAGCT CTGGAGTGAA CAAGTTCAAT GGAGATCCAT CAGCTGCACT TTTGGAGGTT
TTGGATCCAG AACAGAACAC TTCGTTTATT GATCACTACC TTGGTTTCCC CGTAGACTTG
TCTCAGGTGA TTTTTATCTG CACTGCCAAT GAGCCTCATA ACTTGACCAG GCCGTTGTTG
GATCGTCTTG AGATGATTGA AGTTAGCGCC TATGACTACA ACGAAAAGTT AATTATTGGA
AGAAAGTACT TGTTACCAAG GCAGGTGAAG AGAAATGGGT TTCCTGCTTC TGATCGTATC
GAGGAGTTTG TCAACATTGA CGATGCCCTG ATGAAGAAGA TCATTGTAGA TTATACGAGA
GAAGCCGGAG TGAGAAACCT CGAGCGAAAG TTGGGAACGA TTTGTCGTTT TAAAGCAGTG
GAATACTGTG AAGGACTTTC TGGCAAGAGT TTCTACAACC CCAATGTTGA GGAGGCAGAC
TTGCCTAAGT ATTTGGGTAT TCCATACAGC TCTGGAGACT TTTCTTCTAT AGAAACAACC
ATTTCGAACA ACAGTAGAGT TGGTATAGTT AATGGTTTGT CATATAACTC GGACGGATCT
GGATCGGTCT TGGTATTTGA GACTATTGGT TTCGACAAGA GAGTGGGAAA TCCAAATAGC
TCCAACACAG GCTGCTCTTT GGTTATGACA GGTAGATTGG GTGAAGTTCT CATGGAAAGT
GGAAAAATTG GTTTGACTTT CATCAAACTG TTGATCTATA AGAACTTGAT ACAAGCCAAA
GAGCAACCCG ACGATAAGTA TTTGATTGAA AAGTTCAACA ACTTAGAGCT TAACTTACAT
GTACCAATGG GATCGATTTC TAAAGATGGT CCTTCTGCCG GTATTACAAT GGCAACACTG
TTCTTGTCGG TAATACTTGA TAAGCCAGTT CCAGCGGATG TCGCCATGAC TGGAGAAATC
ACCTTGAGAG GTTTGGTCTT ACCCATTGGT GGTGTTAAGG AAAAGATGAT GGGTGCTCAT
TTGAATGGAA ACATCAGGCG AATGATTGTG CCTCGTGAAA ATCGAAAAGA TTTGATTGAA
GAGTTCAGCA GAAGTGTAGA AGAGGCTGGA GACGTTGTTG ATTCCAACTT GATGAACGAA
TTGTTGAAAG ACAATGAGGA AGCTGATTTC AAGATGGATA AGGTTGAAAA ATTCTATTTG
AAGAGGTATG GCATTCAAAT CTTTTATGCC CGTGAATTCT ATGATGTAAT GAAGATTCTC
TGGGGTGAAG ACGATTTGTT GACGAAACCG AAGTCCAACA GAATCCTCGA ATACCACTTG
TAA
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| Protein sequence | MARYKNPKSP AKLKQQIVLP TCKLDSNLVL LPGIIYNVTF SRFKAAALLY RYKDLVSQVS
IINNLLNEYE FNPSKDSDSV EEDDMVTSPI TISKVAVEGI EQFFKYEAAF KNSQGLVSEK
DIAEVAPSNE FDWLTLAIKP NLEKIKEPSN AQIDPTEHNS VVTIARIVGI VDDTTNIKLT
LQAITRGLKI APKKKTRPNE QLLEVDWSSD IPELRRHFKS LKDSSLDLFK VIDKFIVDYR
QALSINSANG NKSNLQITKP GSRYKGANGS SQKPGDLLTL NPLANALYLQ LAGSKDFSKA
FLSLQKLYGQ FASDENLKVD TKSYLRLLDL TCGILPFPNH EKLKLLHKIS IDDRGNELIN
MINQLIKIFD TLDGNNSFVN HWFYNEATNI QKANVVANQL KSIRLLLEGM TNKTRPISNR
GNIKSFNNSE NGNNNKTNGS GITSRRPKSN EDGGEVYDEE DDDEEDDELR AITNFIKYKL
PNITTLSPDS KRLIIKDFKR IRASSQSPGG GGNSDFHVIR NYLEIVMDIP WDKYVTKFKS
NKDIDLNFAK KQLDDDHYGL EHVKKRLIQY LVVLKLLGIN AEKQISDFRK ENQVPSPSSS
GSNLATQNSL VPASSIVIAN NDETSFAHKQ AQNKVKTSIK ESNIENQTNQ SIQVTKYNKS
PIIMLAGPPG TGKTSLAKSI ASSLGRNFQR ISLGGVKDES EIRGHRRTYV GAMPGLIIQA
LRKSRSMNPV ILLDEIDKVI GGSSGVNKFN GDPSAALLEV LDPEQNTSFI DHYLGFPVDL
SQVIFICTAN EPHNLTRPLL DRLEMIEVSA YDYNEKLIIG RKYLLPRQVK RNGFPASDRI
EEFVNIDDAS MKKIIVDYTR EAGVRNLERK LGTICRFKAV EYCEGLSGKS FYNPNVEEAD
LPKYLGIPYS SGDFSSIETT ISNNSRVGIV NGLSYNSDGS GSVLVFETIG FDKRVGNPNS
SNTGCSLVMT GRLGEVLMES GKIGLTFIKS LIYKNLIQAK EQPDDKYLIE KFNNLELNLH
VPMGSISKDG PSAGITMATS FLSVILDKPV PADVAMTGEI TLRGLVLPIG GVKEKMMGAH
LNGNIRRMIV PRENRKDLIE EFSRSVEEAG DVVDSNLMNE LLKDNEEADF KMDKVEKFYL
KRYGIQIFYA REFYDVMKIL WGEDDLLTKP KSNRILEYHL
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