| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_45972 |
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| Symbol | |
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| ID | 4838608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | - |
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| Start bp | 1261892 |
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| End bp | 1262776 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 12 |
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| GC content | 46% |
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| IMG OID | 640389923 |
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| Product | predicted protein |
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| Protein accession | XP_001384538 |
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| Protein GI | 126136028 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5074] t-SNARE complex subunit, syntaxin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.587213 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.488793 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACC CTTACCAGAA AAGCAACACC AACAACAACC CGAACTCGTA CGAGATGGGT
AACTACAACA AGTACTCGTC TGGCTCCAAC GAAGATGACT TTGTCTCGTT CATGAACGAG
GTACAAGACA TAAATAACTC GTTGGACCAG TACTCAAACT TGATCAACTT GATCTCCAAC
AAGCAGAGAA ACTTCATCCA GGAGTTGGAC TTGAACGAGG ATGACACTGA ATACAGCTCC
AAGCAGATTG ATACCCTTGT TGCTGAGGCA CAGTCGTTAC AGTTGGACTT GAAGAAGAGA
ATCAAAAACA TCCAGACCCA AGCTGCGCAC GCCAGAGACC AGACCAAGAT CGACCAGGCT
GAGAACTCGA GAAAGAGATT CTTGGACTTG ATCCAGGAAT ACCGTTTGGT GGAAGTCAAC
AACAGAGAAC AGACCAAGGC TCAGGCCGAG AGACAATATA AGATCATAAA ACCAGATGCC
AGCGATGCTG AAATCAAGGC TGTGGTTGAA GACGGGTCAG ACACACAACA GTACTTCCAA
CAAGCTCTTT TGCAGTCTAA CAGAAGAGGC GAGGCTAGAA CCGTTTTGAA CGAAGTCCAA
GTCAGACACC GTGAATTGTT AAAGTTGGAA AAGACCATGG CCGAATTGAC TCAGTTGTTC
CACGACATGG AAGAATTGGT CATTGAACAA GACCAACCTA TCCAACAGAT CGATGAACAA
GTCGCCAATG CCCAGCACGA TATCGAACAG GGTGTTGGTC ACACCAACAA GGCTGTAGCC
TCTGCCAGAG CTGCCAGAAA GAAGAAGTTG TGGTGTCTTG CCATCTGTGT TCTTATTGTA
ATTATTCTTG CTGCTGTTTT GGGTGGATAC TTCGGTTCCC GTTAG
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| Protein sequence | MSNPYQKSNT NNNPNSYEMG NYNKYSSGSN EDDFVSFMNE VQDINNSLDQ YSNLINLISN
KQRNFIQELD LNEDDTEYSS KQIDTLVAEA QSLQLDLKKR IKNIQTQAAH ARDQTKIDQA
ENSRKRFLDL IQEYRLVEVN NREQTKAQAE RQYKIIKPDA SDAEIKAVVE DGSDTQQYFQ
QALLQSNRRG EARTVLNEVQ VRHRELLKLE KTMAELTQLF HDMEELVIEQ DQPIQQIDEQ
VANAQHDIEQ GVGHTNKAVA SARAARKKKL WCLAICVLIV IILAAVLGGY FGSR
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