| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_45900 |
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| Symbol | LAG1.3 |
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| ID | 4839015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | + |
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| Start bp | 265818 |
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| End bp | 267038 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640390330 |
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| Product | longevity-assurance protein Acyl-CoA-dependent ceramide synthase |
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| Protein accession | XP_001384010 |
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| Protein GI | 126134972 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5058] Protein transporter of the TRAM (translocating chain-associating membrane) superfamily, longevity assurance factor |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0191556 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.283975 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATACCT ATACCCACCG TCACCGGGGT TCCTCTGTCG GAGAAATAAA CGTTGGTGAT
ACAGCTGCTC CAGGTCTTTC CACTATGCGT ACCTCCAAAA GGCAGAGAAA AATGTCGGAT
GCAAGAATTG TAGCTTTGAG CTGCGAATCA AGCTCAGATA TTGCAATATT GAAGAAAATT
GGCATTGCTT CCAGGGAATT GTGCTATAGA CATACTTGGA TAGTTCCGCT CCTTGTATTG
ATTGCATCAT ATAGTACTTA CTGGTTGTCT GGTGTCGATA CCCGGCTTCA TCGTTTCTTG
GAAGCCTTAG TTGTTCCATC TTACAAGATT CCTGGAACAG ACCAATATGG AAAGGGTGAA
AATGACTTTT ATTTCGTTGG TTTCTACGCT ATTTTTTTTA CTTTCTTAAG GGAATTCGTA
GTGGTGTGCG TATTGAGACC TTTGGCAAAA GCTTTGGGCA TTAAAAGGGA ATCAAAGGTA
AAACGATTCA TGGAACAGGG CTATGCCATC TTTTATTACG GTTTATCTGG TCCAGCCGGA
TTATGGATAA TGTCAACTTT ACCACTTTGG TTCTTTGAGA CTACACCGTT CTATGTCAAC
TATCCGCACA AGACTCATGA CTTCTATTTC AAGGTCTATT ACTTAGGTCA AGCTGCTTTC
TGGGTTCAGC AGTCAGTTGT ATTGATTTTA CAATTAGAAA AACCTCGTAA GGATTTCAAA
GAATTGGTCT TGCATCACAT TATCACTATT GCGTTGATTT GGAGTTCGTA CAGATTTCAT
TTCACTTGGA TGGGCTTGGA AATATTCATT ACTATGGATG TTTCAGATTT CTTCTTAGCT
TCATCGAAGA CCTTGAACTA CTTGGATTAC GCAATTTCTG GCCCTTTCAT TTTTGTTTTT
GCCTTGATTT GGATTTACCT CAGACACTAC GTGAACATCC GAATCTTGTG GTCTGTACTA
ACTGAATTCA GAACTGTCGG AGAATGGGAA TTGAACTGGG ATACTCAACA ATACAAATGC
TACATTTCCC AGCCAATCGT CTTTTTCTTG ATTGCTGCCT TGCAAATAGT CAATTTGTAC
TGGCTCTTCT TGATCTTTCG TATTCTTTCG AGATACATTT TTGGAGGAGT CGCCAAGGAC
GAAAGAAGTG ACGACGACTC CGAAACTGAG GAAACTGGCG AGGAGGAAAC TGGCGAGGAG
GAAGCCAAAA AGTACCAATA A
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| Protein sequence | MDTYTHRHRG SSVGEINVGD TAAPGLSTMR TSKRQRKMSD ARIVALSCES SSDIAILKKI
GIASRELCYR HTWIVPLLVL IASYSTYWLS GVDTRLHRFL EALVVPSYKI PGTDQYGKGE
NDFYFVGFYA IFFTFLREFV VVCVLRPLAK ALGIKRESKV KRFMEQGYAI FYYGLSGPAG
LWIMSTLPLW FFETTPFYVN YPHKTHDFYF KVYYLGQAAF WVQQSVVLIL QLEKPRKDFK
ELVLHHIITI ALIWSSYRFH FTWMGLEIFI TMDVSDFFLA SSKTLNYLDY AISGPFIFVF
ALIWIYLRHY VNIRILWSVL TEFRTVGEWE LNWDTQQYKC YISQPIVFFL IAALQIVNLY
WLFLIFRILS RYIFGGVAKD ERSDDDSETE ETGEEETGEE EAKKYQ
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