Gene PICST_45639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_45639 
Symbol 
ID4838656 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp1494996 
End bp1496024 
Gene Length1029 bp 
Protein Length330 aa 
Translation table12 
GC content42% 
IMG OID640389971 
Productpredicted protein 
Protein accessionXP_001384589 
Protein GI150865391 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAGA GGTATATCGA GCGGAAAAGA GTGTATTCCG GACATGTTCT GGACGTGTTC 
CGAGCGCGGG ATATCAGTTC CGGTCAATTG GTCTGTTTAA AGGTTGTAGA CGGTGATATC
AGTATCAAGC CTCATAGTAT GAAGAGAGAA ATCACCATAT TGAAGGAGCT AAAAGGCGGA
AGTAACATTC TTCAGTTTCT AGACTGGTAC GAATTGTTTG ACGATGTGGT TATGGTCAGT
CGTTGGTACG AATACACGCT TGTGTCGTTG CTCCAGAATG CAAAGTATAG TCGTAAGGTA
ACGAGGTTTG ACTTTGCCAA TCCTTTAGAC AATAAAGTTA ACATTGTAAG CAAAGTAGAT
GATTTGAGTG CCAAAGGCTT TTTACAAGCG ATGGCATCTG GATTGAGCTA CATACATAAG
CACGGAATAA TTCATCGGGA TATTAAGCCA TCCAATATCT TGTTCGCAGA TGATGATATA
ACCAAGCCAG TGATAGGTGA TTTTGGAATC AGCTATAATG GTCCGTATAG TGACGAGTCT
GACGATTGCA AGTTTCTTGA TGTGTGTACT GGCATCTACA AGGCTCCTGA GTTGTGTCTT
GGTAAATGCG ACTACGGAAA CGAGATTGAT ATCTGGTCAT TGGCAGTAGT CCTTACAATA
GTGTACTCGT CGGACTTCAC ATCAATTCTA GTAAAGAGAA AAGGAAATAA TGAAGAAGAG
GAGGAGGAGG AAGAAAATGT TGTCAGTGAT TTGTGGCTTC TCAGCACAAT CTTCAACAAT
TTTGGCACCC CTTTTGTTAA CGAAGGCCAA TATGAAGACG AGAGCCTATA TTGGCCCGAG
CTACAACTGG ACAAATATCA CTTTGTCGAC TTCCAGTTTG TGCACCAGAA TCGGAAGCCA
GATACTGAGT TGCTTCCAAA GTGTCGGGAT CCAGTTGCGA CCTCTGTGTT TAACGAGATG
ACTAGATACA GACAGAGAAT TACTGCCCAA GAGATATGTG ACAAGCTCGC TATAGAAGAG
AATAGATAA
 
Protein sequence
MDKRYIERKR VYSGHVSDVF RARDISSGQL VCLKVVDGDI SIKPHSMKRE ITILKELKGG 
SNILQFLDWY ELFDDVVMVS RWYEYTLVSL LQNAKYSRKV TRFDFANPLD NKVNIVSKVD
DLSAKGFLQA MASGLSYIHK HGIIHRDIKP SNILFADDDI TKPVIGDFGI SYNGPYSDES
DDCKFLDVCT GIYKAPELCL GKCDYGNEID IWSLAVVLTI VYSSDFTSIL EEENVVSDLW
LLSTIFNNFG TPFVNEGQYE DESLYWPELQ SDKYHFVDFQ FVHQNRKPDT ELLPKCRDPV
ATSVFNEMTR YRQRITAQEI CDKLAIEENR