| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_45532 |
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| Symbol | |
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| ID | 4838481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | - |
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| Start bp | 1387463 |
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| End bp | 1388980 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640389796 |
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| Product | predicted protein |
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| Protein accession | XP_001384565 |
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| Protein GI | 150865377 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.533075 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCCTG TAACTAAGAA ACAGAAAACT GAAACTGTCA AATCCAGAAA GCCTATCATC
ATCAATGCCT TTGATATGGG AACTCCTGGG CTCCAATGGC CTGGTCTTTG GAAGCACCCC
AAGGACAAGT CCAGGGACTA TAACAAGATT GAGTACTGGA CTAACTTAGC CAAATTGCTT
GAGAGAGGAA AGTTCAATGC GCTCTTCATT GCTGATGTCT TGGGTCCCTA TGACGTATAC
AAAGGTCCTC GTAATTTGAC TCCTGCTGCT ACCTCTGGAG CCCAATGGCC CATAAACGAA
CCTAGTGCTG TAATTGCTGC TATGGCTGCA GTGACCAAGA ACTTGTCTTT CGCAGTTACT
TCGAGTACTA TCAGTGAAGC TCCATATCAT TTCACAAGAA GATTGGCTAC CTTGGACCAT
TTGACAAACG GGAGAGTTGG TTGGAATATC GTCTCTTCTT ATTTGGACAG TGCTGCTAGG
AACTTGTTGA ATGGAGAATC GTTACCTCCT CACGAAGAAA GATACGCTAG AGCCCAAGAA
TATTTGGAAG TAGTTTACCA ATTGTTCTTG TCTTCTTGGA GAGACGACGC CGTCAAGTTG
GACCGGGAAA GAGGAATCTT CTCCGATCCC GACTTGATTA GAGAAATCAA CTACGAAGGT
AAGTTCTTCA AGGTCCCTGG CCCAAATATC ACAGAGCCTT CTCCTCAGAG ATTGCCAGTT
ATCTTACAGG CTGGGTCCTC TAAATCTGGT CTTGAGTACG CTGCCAGAAA CGCCGAAGCT
GTTTTTATCA ACGGTTTGAA CCCAGAAGGG TTGGGCGTAA AGATCAAAAA GTTGAAGGAA
CTTGTCAAGA AGTATGGCAG AAACCCTGAT GATGTCAAAG TTGTTCAATT GGTTACTGTA
ATAGTCGCAG AGACACATGA CGAAGCCGTA GAAAAGTTCT TGGAATACAA GAGTTATTCC
GACGTCGAAG GAGCACAGGC TCTCTTTGGA GGATGGACCG GTATCGATCT CAACGAATAC
GAGTGGGAAC AAGAATTGAA CCAAGTGGAA AGTAACGCAG TAAAGAGTTT TGTAGAAAAC
TGGACTAAGA AGTTGCCTAC AGACCCCGAA AACGTCAAGA AAACCAGATC ATACATTGCC
AATCTGGTTT CCACAGGTGG TTCAGGAGTA CTTTTCTACG GAAGTGCTGA AGAGGTAGCA
GACGAAATCG AGAGATGGGT GGACATTTCT GGTGTTGACG GGTTCAACTT CACTTATGCC
ATTACTCCAG GTAGTTTTGA GGATATTGTC GATATTTTAC TTCCAGTATT GAGAGAACGT
GGTTTGGCTT GGGAAGACTA TCCTAAGGAA GGCCTTACAT TCAGAGAAAA CCTTTACGGT
ACAAAGGGAG AAGATCCTAC GTTCCTTAAG CCTGAACATC CAGCTTACAA TTTAAGATGG
AAGGCAGGTG AGACTAAGGA AGAGTTCGAA GCAAAGTTAC AGAAGACTGT GGAGGAGAAC
TTCAGTTTCC ACAAATAG
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| Protein sequence | MAPVTKKQKT ETVKSRKPII INAFDMGTPG LQWPGLWKHP KDKSRDYNKI EYWTNLAKLL
ERGKFNALFI ADVLGPYDVY KGPRNLTPAA TSGAQWPINE PSAVIAAMAA VTKNLSFAVT
SSTISEAPYH FTRRLATLDH LTNGRVGWNI VSSYLDSAAR NLLNGESLPP HEERYARAQE
YLEVVYQLFL SSWRDDAVKL DRERGIFSDP DLIREINYEG KFFKVPGPNI TEPSPQRLPV
ILQAGSSKSG LEYAARNAEA VFINGLNPEG LGVKIKKLKE LVKKYGRNPD DVKVVQLVTV
IVAETHDEAV EKFLEYKSYS DVEGAQALFG GWTGIDLNEY EWEQELNQVE SNAVKSFVEN
WTKKLPTDPE NVKKTRSYIA NSVSTGGSGV LFYGSAEEVA DEIERWVDIS GVDGFNFTYA
ITPGSFEDIV DILLPVLRER GLAWEDYPKE GLTFRENLYG TKGEDPTFLK PEHPAYNLRW
KAGETKEEFE AKLQKTVEEN FSFHK
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