Gene PICST_45522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_45522 
SymbolCBR3 
ID4838422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp908782 
End bp909672 
Gene Length891 bp 
Protein Length296 aa 
Translation table12 
GC content47% 
IMG OID640389737 
ProductNADH-cytochrome b-5 reductase 
Protein accessionXP_001384127 
Protein GI126135206 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.443636 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.123959 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGACA AACGAGAGCT TTTGAAGCAG CCATTGCACG GGATCTACAT CCCCATAGGC 
CTCATCATCT TTGGTACGCT TATGTTCGGC TACGAGTACT TACCCTATTC CATCGGGTTC
ATAGTAGTTG TTTGTTCCAC GCAGTTGTTT TTTGCCTACA AAAGACGTTC CTCTATGGAC
AAGGTCAAGT GGCAGGATTT TGAACTTGTT GACAAGACCA TCATTGCGCC CATGACTACG
ATCTACAGAT TCAAGCTCAA CAGAGATGAT GAGGTGTTGG ATATCCCTAC GGGCCACCAT
TTGGCCTGTT GTTTCACTAT AAACGGCAAA GATGAAGTCC GCTACTATTC GCCAATCAGT
AACCAGTTCG ATGCCGGCTT TTTTGACATC ATGGTCAAAC ACTACGAGCA CGGTGTCGTC
ACCAAAAGGT TGGCCCAGGT TGCAGAAGGG CAGACTGTCA AGTTCAGAGG TCCTTTTGGA
AAGTTGGACT ACAAACCCAA CATGGCTAAG GAGCTTGGTT TGATCGCTGG AGGATCTGGT
ATCACGCCTA TTCTCCAGGT GATCACGAAA ATCATCACCA GCCCTGACGA CACCACCAAG
GTCAAGTTGG TTTTCGCTAA CAATTCTGAA AAGGACATCT TGTTGAGAGC AGAAATCGAC
GAAATCGCTT CCAGATACCC AGGCTTCTCC GTGGAATACG TATTGACCAC TCCTTCCGAG
GACTGGACCG GAAGCTCAGG CTATGTCACC AAGGAAATCG TAGAAAAGTT CTTACCTTCG
CCTGATCCCG AAAACAAGAT CTTTGTCTGT GGCCCTCCCG AAATGAAAAA GTCGGTGGCA
AAGATCACCG CAGACTTGGG CTACCAGAAG GAATCTGTTT TCTTCTTCTA G
 
Protein sequence
MEDKRELLKQ PLHGIYIPIG LIIFGTLMFG YEYLPYSIGF IVVVCSTQLF FAYKRRSSMD 
KVKWQDFELV DKTIIAPMTT IYRFKLNRDD EVLDIPTGHH LACCFTINGK DEVRYYSPIS
NQFDAGFFDI MVKHYEHGVV TKRLAQVAEG QTVKFRGPFG KLDYKPNMAK ELGLIAGGSG
ITPILQVITK IITSPDDTTK VKLVFANNSE KDILLRAEID EIASRYPGFS VEYVLTTPSE
DWTGSSGYVT KEIVEKFLPS PDPENKIFVC GPPEMKKSVA KITADLGYQK ESVFFF