| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_45364 |
|---|
| Symbol | |
|---|
| ID | 4838426 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009044 |
|---|
| Strand | + |
|---|
| Start bp | 598217 |
|---|
| End bp | 599119 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640389741 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001384077 |
|---|
| Protein GI | 150865027 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3665] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0471946 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTACCG AAACTACCGA CGCCTGGTCT TCTCAGACTC CGCAGAAAAC CACCTACAGA
GTTCCCAAAC CCAAGCCAGC CTATTATCCC CATGCTGGCT CGCCTCTCTA TGCTGACAGA
GAGCTCTACA CCAGGATTGC CGAGGCTCCT CGGACATTGG TTGAGAAATA CAGGTGTGAA
CCACGTTCTG CCATCGCCGT CAAGATCCCA GCCAAGTCTG TCTTCAGAAT CACTACTCCA
GAAGGGCCTC AGGTGTGCGA TTTGAACATT TGGAACTTGC ACAATCCTCG AGAGAGGTTC
TGGGCTGCCC GTACTAGACA ATTGCACTCA GCCCATGTTT CCACTTTCGA CAGGTTGTGG
TCCAACTTGC CCTACTTGCG TCCGTTGGTA ACAATCACAG CAGACTCTCT TCTGGCCAGA
CATGACGAAT GGGGTGGAAG AGTGCACGAC ACCTTGGGAA CAAGATGCGA TCCTTATGTC
GACAAACTTA TCAGTGGAGA AGACAACGAC TTTCACTGTC ACTCCAACTT GACCAGAGCT
GTGTTGCCTC ATGGATTGAC TGAGTTCGAC GTACATGATG TATTGAACGT TTTCCAAGTC
ACCGGCTTGA ACGAATACGA CCAGTATTTC ATGGAAGCAT GTCCAGCTAC AAAGGATGAC
TACTTTGAGT TGTATGCTGA ACAGGATTTG TTGGTGGCTA TTTCTGCATG TCCGGGTGGA
GACTTATCCC AATGGGGTTG GGGTGAAGAC AGCGACAACT TGGAGGGTCT GAAGATGGTC
GATTGTTGTA GACCTTTGGG TATTGAAGTG TATAAGATTG ACGATGAAAA TGAAGTGTTG
AAAAAGTGGA AGGCCCCTGA AGTCGTCAAC TACAAGGGTA ACCACGGTCT CAAGGGTCCA
TAA
|
|---|
| Protein sequence | MSTETTDAWS SQTPQKTTYR VPKPKPAYYP HAGSPLYADR ELYTRIAEAP RTLVEKYRCE
PRSAIAVKIP AKSVFRITTP EGPQVCDLNI WNLHNPRERF WAARTRQLHS AHVSTFDRLW
SNLPYLRPLV TITADSLSAR HDEWGGRVHD TLGTRCDPYV DKLISGEDND FHCHSNLTRA
VLPHGLTEFD VHDVLNVFQV TGLNEYDQYF MEACPATKDD YFELYAEQDL LVAISACPGG
DLSQWGWGED SDNLEGSKMV DCCRPLGIEV YKIDDENEVL KKWKAPEVVN YKGNHGLKGP
|
|---|
| |