| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_45361 |
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| Symbol | RHO3 |
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| ID | 4838919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | - |
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| Start bp | 268503 |
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| End bp | 269189 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640390234 |
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| Product | GTP-binding protein of the rho family |
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| Protein accession | XP_001384349 |
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| Protein GI | 150865221 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1100] GTPase SAR1 and related small G proteins |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.381371 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTTCTGTCTG TCTCATATTT CCATACTAAC AATCTAGTAC AACGTAAGAT AGTCATTCTA
GGCGACGGTG CCTGTGGGAA GACTTCCCTA TTGAACGTTT TCACACGAGG CTACTTTCCT
CAAGTGTACG AACCCACGGT ATTTGAAAAC TATGTGCATG ATATATTTAT AGATGGCCAG
TCGGTAGAGT TGTCCTTGTG GGACACGGCT GGACAAGAAG AATTTGATAG ATTGAGATCC
CTTTCATATT CTGATACACA TTGTATCATG TTGTGTTTTT CTATTGATTC GCCAGACTCG
TTAGAGAACG TCCAATCCAA ATGGGTGGGA GAAATAGCAG ATCATTGTGA AGGTGTCAAG
TTGGTGTTGG TAGCTTTGAA GTGCGACTTG AGAAGCGACG AAGACAACGA AAGCCATGCC
CACATCAACG GAACTGAAGA AGAGTTTAAC CCGTACTCGC AGAATGCATC CAACAACCAG
TACCAACAGA ACAAGCGATT AATCACATAC GATGAAGGTT TGGCAGTAGC AAAAAAGGTT
GGTGCCTTGA GATACTTGGA GTGTTCAGCC AAAAAGAACA GAGGTGTCAA CGAAGCGTTT
TCGGAGGCTG CCAGATGTGC TCTTAATGCC CGGCCAAAAG GTGCCAACGA TAATGAGCCT
GAAAAGAAGG GCTGTACCAT CATGTAA
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| Protein sequence | FSSVSYFHTN NLVQRKIVIL GDGACGKTSL LNVFTRGYFP QVYEPTVFEN YVHDIFIDGQ
SVELSLWDTA GQEEFDRLRS LSYSDTHCIM LCFSIDSPDS LENVQSKWVG EIADHCEGVK
LVLVALKCDL RSDEDNESHA HINGTEEEFN PYSQNASNNQ YQQNKRLITY DEGLAVAKKV
GALRYLECSA KKNRGVNEAF SEAARCALNA RPKGANDNEP EKKGCTIM
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