Gene PICST_45061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_45061 
Symbol 
ID4838855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp1371914 
End bp1372816 
Gene Length903 bp 
Protein Length300 aa 
Translation table12 
GC content47% 
IMG OID640390170 
Productpredicted protein 
Protein accessionXP_001384561 
Protein GI150865373 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.401589 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TCTCCATGGA GAAAACAAGT TTCGGGAGTA ATGGGCTCCA CTTCGTTGGC ATGCTGGATA 
GTTCTTCTCA TGCCTCAGCT TATTGAGCAA TGGAGATTGA AGTCTGCCGA AGGCATTGCT
ATTGGCTTCA TTTGCATCTG GTTCATGGGC GATGTGTTCA ACTTGGTGGG TTCAATCTGG
GCGGGCTTGC TTCCTGAAGT CATCTTCCTT GCCGTATGGT TCTGTATTGC TGACTTCTTG
ATCATTGCTT CCTATTTCTA CTATACCCAC ATTTTCCCAA AACACCACCA CAGCCACGGT
AAAAGAAAAA GCACCAGTAG CTCTGTAGGC GAACGTCACC ATCACGATCG CGAGAACCAC
CAACATGAAG GTGCTGCTCA CCACGAACAT CACCATCACG AACACGAATC TTCTCCTTTG
CTCAGAAGAA GATCATCTAC CTTGACAGAT ATTGCCTTGG AACCAGAATA TCACAGCATA
TTCATTAAAT ACGTATTGCC GTTGATTTTT GTGGTTGCTT GCGGCTTGAT GGGTTTCTTC
TTAGGAGGAT CTTCCACTGG CGAAGGTGAC GATGCTCCTC TGCCTCCTGA CGATATCCGT
TTGGGTCCTC AGATCATGGG CTACATGTCG GCGTTGCTCT ACTTGGGAGC ACGTATTCCT
CAGATCATCC AGAACCACCG CCGGAAGTCG GTCCATGGCT TGAGCTTGTT GTTCTTCTTG
TTCTCTACCT TGGGTAACTT GACTTACGCT GGCCAGATTT TGTTCTTCCG TAGTGACTCC
CAGTATATCT TGCTTAATTT AAGTTGGTTG TTGGGTTCTT TGGGAACCAT CTTCGAAGAT
AGTTTCATCT TCTTGCAGTT CTACATCTAC CAGGACAACG ACAAGGAAGA TGCCGTTGAA
TAA
 
Protein sequence
SPWRKQVSGV MGSTSLACWI VLLMPQLIEQ WRLKSAEGIA IGFICIWFMG DVFNLVGSIW 
AGLLPEVIFL AVWFCIADFL IIASYFYYTH IFPKHHHSHG KRKSTSSSVG ERHHHDRENH
QHEGAAHHEH HHHEHESSPL LRRRSSTLTD IALEPEYHSI FIKYVLPLIF VVACGLMGFF
LGGSSTGEGD DAPSPPDDIR LGPQIMGYMS ALLYLGARIP QIIQNHRRKS VHGLSLLFFL
FSTLGNLTYA GQILFFRSDS QYILLNLSWL LGSLGTIFED SFIFLQFYIY QDNDKEDAVE