Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_45061 |
Symbol | |
ID | 4838855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | - |
Start bp | 1371914 |
End bp | 1372816 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 12 |
GC content | 47% |
IMG OID | 640390170 |
Product | predicted protein |
Protein accession | XP_001384561 |
Protein GI | 150865373 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.401589 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TCTCCATGGA GAAAACAAGT TTCGGGAGTA ATGGGCTCCA CTTCGTTGGC ATGCTGGATA GTTCTTCTCA TGCCTCAGCT TATTGAGCAA TGGAGATTGA AGTCTGCCGA AGGCATTGCT ATTGGCTTCA TTTGCATCTG GTTCATGGGC GATGTGTTCA ACTTGGTGGG TTCAATCTGG GCGGGCTTGC TTCCTGAAGT CATCTTCCTT GCCGTATGGT TCTGTATTGC TGACTTCTTG ATCATTGCTT CCTATTTCTA CTATACCCAC ATTTTCCCAA AACACCACCA CAGCCACGGT AAAAGAAAAA GCACCAGTAG CTCTGTAGGC GAACGTCACC ATCACGATCG CGAGAACCAC CAACATGAAG GTGCTGCTCA CCACGAACAT CACCATCACG AACACGAATC TTCTCCTTTG CTCAGAAGAA GATCATCTAC CTTGACAGAT ATTGCCTTGG AACCAGAATA TCACAGCATA TTCATTAAAT ACGTATTGCC GTTGATTTTT GTGGTTGCTT GCGGCTTGAT GGGTTTCTTC TTAGGAGGAT CTTCCACTGG CGAAGGTGAC GATGCTCCTC TGCCTCCTGA CGATATCCGT TTGGGTCCTC AGATCATGGG CTACATGTCG GCGTTGCTCT ACTTGGGAGC ACGTATTCCT CAGATCATCC AGAACCACCG CCGGAAGTCG GTCCATGGCT TGAGCTTGTT GTTCTTCTTG TTCTCTACCT TGGGTAACTT GACTTACGCT GGCCAGATTT TGTTCTTCCG TAGTGACTCC CAGTATATCT TGCTTAATTT AAGTTGGTTG TTGGGTTCTT TGGGAACCAT CTTCGAAGAT AGTTTCATCT TCTTGCAGTT CTACATCTAC CAGGACAACG ACAAGGAAGA TGCCGTTGAA TAA
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Protein sequence | SPWRKQVSGV MGSTSLACWI VLLMPQLIEQ WRLKSAEGIA IGFICIWFMG DVFNLVGSIW AGLLPEVIFL AVWFCIADFL IIASYFYYTH IFPKHHHSHG KRKSTSSSVG ERHHHDRENH QHEGAAHHEH HHHEHESSPL LRRRSSTLTD IALEPEYHSI FIKYVLPLIF VVACGLMGFF LGGSSTGEGD DAPSPPDDIR LGPQIMGYMS ALLYLGARIP QIIQNHRRKS VHGLSLLFFL FSTLGNLTYA GQILFFRSDS QYILLNLSWL LGSLGTIFED SFIFLQFYIY QDNDKEDAVE
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