| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_45043 |
|---|
| Symbol | |
|---|
| ID | 4838393 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009044 |
|---|
| Strand | - |
|---|
| Start bp | 191639 |
|---|
| End bp | 192100 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640389708 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001384336 |
|---|
| Protein GI | 126135624 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.251497 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATATTC CCACGTTGGC CATTCCCGGC GATAACGGCA GTCAGATACA ATCGCAGCAG
CCTATGTATA CTGGACATTT GCAAAGAAAG CAGGCACCTG AGGGTTCTGC TGAATGGTAT
TTCGACCAAG CAGGAGACTG GATGGGTAAC CATCCGTGGA TTACGGGTCT TGGCTTGTTT
GGAGTGGCGT ATTTTGCATC TGGGTTTGTG AAATCGAACC AGCCAGGACT TAATGGCAAG
GCATTTATCA AGGGTGGCTT TGGACAGAAA ATGACTGCTA AAGAGGCCCT TCAGATTTTG
AACTTGAAGG AGACCAATTT GTCCAAGTTG AAGTTGAAGG AGCAGCACAG AAAGTTGATG
ATGGCCAACC ATCCAGATAA AGGTGGTTCT TCGTTCTTGG CCACCAAGGT GAATGAGGCT
AAGGATTTCT TAGAGAAGAG AGGAGGCTTG AAGGCAAAGT AG
|
|---|
| Protein sequence | MDIPTLAIPG DNGSQIQSQQ PMYTGHLQRK QAPEGSAEWY FDQAGDWMGN HPWITGLGLF
GVAYFASGFV KSNQPGLNGK AFIKGGFGQK MTAKEALQIL NLKETNLSKL KLKEQHRKLM
MANHPDKGGS SFLATKVNEA KDFLEKRGGL KAK
|
|---|
| |