| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_44887 |
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| Symbol | |
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| ID | 4838530 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | - |
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| Start bp | 1125180 |
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| End bp | 1131632 |
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| Gene Length | 6453 bp |
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| Protein Length | 2077 aa |
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| Translation table | 12 |
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| GC content | 39% |
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| IMG OID | 640389845 |
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| Product | predicted protein |
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| Protein accession | XP_001384517 |
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| Protein GI | 150865341 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.89759 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAAGGA GACCCTCGTA TAGCACTATA GAGTCGCTGC GGGAACTGCA CTACAACTTA
GACTATCCCA CGGACAGGAA GTTATTGTCT GAACTCCAGC TCGATTCCTC TTCTCGTTTC
TATGCTCGTT CCAGAAAAAG AACGCTTGAT CTTCCAAGCT TGCTTCCGTA TGCAACAGAA
AACCCACAGG ACCAGGCCAA GTTCTTGAGT CACATCGTAT CGCATCTCTA TATAGCCATC
AAGACGTTGG ATATTCAGGG CTCACTTCTG GTGCTGGCCA AAGACATTGC TGCTTTGAAG
GATATCGCTG GCTTATCGGA TATTGACCTT GCGCTCGAAA CGAATTTGTT CGAAATGAAC
GCTTCATCAC AGGATTTAGC ACAAACTGAA GGTGCAGAAG ACGAAAACTA CTTATCTGTA
GAATATGATA CAGATACAGA CCACGAGGGG GAGGACGAAG AAGACGATGC CGATGAAGAC
GATGGTGAAA GTGAAGGTGC GGTGCAACAC AAAAAATCGC CCAAATCAGC AGCTGTAGTC
TCAGTCAGAA CATGGACTCA CGAGTTGCTT GTGTGGTTGA AGATGAAATA CGACATGCCC
GTAAAGTTAC GCATGTCTTT GGCCAAAGTA TACTATGCCA TCTGCCTTTC ACGTGGTCAA
CACATTGGAC TCAAGACCTA CGTCAAAGTC TTTGAGCTAC TCACCAAAGA TGTTCGTCTC
TTGAAGCAGC AGCACTTCAA ATTGGACTGG AAACAGTTAC AGCAAGAATT GTCTTACCAT
TTTCCACCTG TAGATACGAC ATTGGACCAG TTTGAGAAGA AGGAACACAA GCAAATCTTG
CGTCTCGCCG CCAGAGCTTC CCATTTCTTT CCGGAAGACT CATTGGCTAG CATATATAAG
AAACTTGGTA GTCAGTTTTC CATAACGAAC GCTTCTTTAG TGATGTCTTC GATGTCTTTG
TTGCCTCATA CGTTCGTTGC TGGTGGAGAA GACAACGAGA ACGATATACG CCACTATATC
CCTTCGTTCT TTTACATGTG GCAGAAACTT AGTCATGCTC TGGGATTTGA TGCGCAAGTT
ACTGCAAGAC TAGGAGTTGT AGCCATGTCT GCTTTGACAA AACTTAACGA CGATGCGCTG
GCTGGTGAAT ATTTGAAACT TGGAAAATTC GGAATTTTTA CGGAGGATCA AATGGAATAC
CTCATCAACT CGCTTATTAA CAGCTTGAGT ATAATGGTCG AGAAGTATTC TTCGTTGAAG
ACGAAATACT TCCATGGATT TGCATCTGCT ATAGTCTACT CTCTTAATGG TTCTAGTGCT
TTGGAGCCTC ATGGCCTAAT ATACTACTTG AGGACTTTGC TCAATGCTAT TGAGAGTTAT
GTTCATCCAT CAAATACTGG TGAATGGTCT CGTCCCATTT CGAAATTGGT GCTCAGCTTG
ATATACCAAT TCCACAAACG TTTTAACACC GAAAATGAGA AGGCTGGAGT GTTGCATGAT
TTACCGGTCG AATTGAAGCT AAGTGATGAA GTGGTAACAG AATTTGTCAC CATGTTCTTG
CCGATCATCA GAACAGGCAT TCAATCCAAA AAAAGTAGCG CTACGGACGA CTATTTGTCT
TCAGTACAAT TACTTGCATT CTTGAAACCA GACATGGTAC TAGAATATTT GTTGGTAGAT
ATATACGAGT CTCTTCAGGG AGTGATTTCT ACCCATAGAG TCATCATTGC ACTTAGAACA
ATAGAATCAT TGTCAAGATT TTTTGCTTCA AGACCAATTT TCCGAGTACA CGTTACTACG
ATTTTGCAAT TGGCATTGCC TGGTATTGAT ACAAATGATT TAGAGAAGAC TATCCATACA
TTAGATGTAT TTGCGTCCAT TTCCAATTTT GCACCTTTTC ACGATTTGAC CAACGGATAT
GGTGATCCAG CAATTGCATC TCAATTTGTA CAGGGTCATT TAGAGCACTT GAAGGCGAAG
ATGTATATTG AGAAGGAAGA GATTCCATTT GAGGTCAATC ATGAACTTGA ACTTGAAGCG
CTCAAGTCAT CTACTTCTGC ATTTAAGAGA ATTATGAACT CTCTTAGTGA AAGATTATTC
ACCCTTCTTA AGAATATCCC AGATCCATCC AAAAGTGATG GAATAGAAAA GGATTTGGCC
GAGTCCTTAC CAAAGTTCTT GTATGTACTT TTAGAGTCAT TGTCTGACGA TATATTTGAA
TCATTCCGGA ATGAGTTCTT TGATTTTGTC CTTAACAACA CTTATCATAC CATTGCTGAT
GTTTCTGCGG AAATTTGTGG TGGTTTGATC AAACGTGACC CAAAGAGCTT CAAGAAGTAT
TCTTCTATCT TCATTGACAG AATTATCGAA GAAGTAGAAG AAAATGGAGC CGGAGTTTCT
AGAACTGGTG TAGAAATCTT GCCTCGCGAT CAAGCCTTAT TTTGGAACTT GGTAATATTA
AATGAATGTA TTGGGAATGC CGGTACGTAT GTTGTTGACT CTTCCAAAAA ATTGATGAAG
CTATCCTACT TCCTCATGGA GCATGTTAAG GGTCCAACAG TATTCTCAAG TTCTTATCTT
GTCAATCAGA TGTTGCAAGC AGTCACAAAG GTTAGACTTA ACGAGAATAG AATCATCGCT
CCCGCATACG AAAGTAAATA CGGAGTTGAT GAAAAGTGTT GGGGAGCATT TCAATTTGAC
GAAGATAGAT TTCTGGAAGA AAAGACCAAT TTTGACTGGT TTATTCCAAC AGATAAAGAA
ATTTCATTTG CTGTGGAATG CTTCAATGGC CATGTGTCCA AGAGTTTGGA TAACATTCTG
AACTTGATGA AATCTTTTAA CAAGGAGAGC CATCTAGATG CTTCGAAGTC TCTTCAACTA
TCTGACGAAT TGAGGATGAA TCTTTTATAT TTGGGGTACT GTTTGAGTGG TGTCTCTTAT
TTGTTAGATC CATCATTCAA TGAGGATATT CCAAAGTTGA ACCATCAATC AGAGTCAATA
CAGCAACGTT TAATGTTGTT GAAAAATTTG AGGGCATTGA AAGGTGCCTC TCTTCTGAAA
GACGATTCAT ATGGCGATAG TCAGCCAGAA AGTTTGGATA GAATTGTTGA AAACTTAGGT
AATGATGATC TCTTAAACTA TTTGTTAGAT GATGATGCTC TCAATGACTA CTTGCTTCAG
GAAGAAGAAA ATGTTAACTT CAACCATAAT GGTGATCACG AAAAAGATCC AGATGATCAA
CAAGAAGAAG AAAAGGAGAA GATCACTCAC TTCCAAGATC AATCGTACTC TGCTGTCAGA
GAACATTTTT TCGCATCGCT CGGTAAGTCC GAGTCATTGG AAATGCCAAT AACAGCAGAT
ATTTCTGCTA GAGCCACTCC ACAAATCGAG GGGGTTGATA TGTCTAGTAT GAATCCTGCC
ATTACTTTTA GAGAGAGAAA GTTATACACG TCAAACTACT ACTTTGGAGA TGACATGGAA
AACAGAAAAT CAAGTGACTT GTATTTGAAA TTGCACAAGA CATACCACTT GATTGGGAAG
AGTTTACATA TCATCTGCAA ATTCTTGACT GCAAACTTTC TCGACAACAC GAAGATTTTC
AAGCATTTTA TTTATGTTGC AAATATCTGG TTTGCTGATG TTGGAAGAGA GAGAATGCTT
GACTCAAGTC ACGCTAGAAT CAACTACGGT TATGTTAGCA GCATCCAAAG CATCAATAGA
GTTCGTAAAC CGTTCACGCG TATTGCTATT AGTGCTAGAC TCGAGGCTTA TCATCTGCTC
AGAGTTGCTT TGCATGCAAC TTCAAGAACT CAAACAGATC TTGACCGGTT TCTTCTTGAA
GATATTGTAA AATTGTCTGT ATCCACATAT ATTGCTATTG CAAAATCATC GCAATCTTTA
TTGTTGGATG CGATGAAGAG ATTGAATGGT TCATACAGTG TTATCGTCAA ATCTGCCTTC
AAATATCTCA CGAGAGCTCT AGATGAGAAC GACCACAAAA AGATCGAAAG TGGATTAAGT
ATATTTTCGT TAAGAAGAAT TAAAACCCAC ATCAGAAACG ATTTTTTCAA TGTTCAGAAA
TACGTTGAGC TTTTACTTCG TTGCTTAGAT GTGGATAGCG TCGAAGTTCA CAATGTCGCA
CACGCACTTT ACGATGGTGT CTTTAAATCA ATCACTCCTC CAAGCAGTGT TTGTTTGATC
GACCATTCCG AAATTGACAC TATTAGGCCG CCTGATGAAT TTATCGACTT GGAAATCAAA
GCAGTAAGAT TTGCAAAGGA AAGGAAGAGG AAATTGTATT TTGACAAGTT GAAGAAATTA
GAAAACAGCG TACTTGCAAA AGAGAAATCC AATTCCCATT GGAAGACAAC ATCATTGAAC
TTGTCATTGC TCATTAATTT ACAATCCTAC TTAGAAATTC CAACTAGTGA CGAAGTATTA
CAGCTTTTGG CAAAAGAGGC CTCTCGCGAC CATCCTACCA TCTCTCGATT AGCGTTGAAA
GGTGTAACTC GAATTGTTAA CAAGCTAAAT TTGTTAAGTA CCCTCGATTA CAAATTGGAA
AATGCTTATG ATTTCAATTT CGTACCAAAG GGTCTCAAAC TAGTCGATAC GAGGCCTAAG
AAGGGAGAGT CTTATTTTGT TGATTGGAGA AAGGAATTGA GGAACGTACT GGAACCAACT
TATTTCGTTG ATCATAAAGC AAGCACTGGC TGGTTATTCT GGAATGACGC AATGCCAGTA
ATAGCAGCCG GTCCAGTGAT CAAGATGAGT TTGGAAGTTC TGGACGAGTT GGCATTAAAA
GGATTCAGCA GCTATGTGTC TAAGGAGTGG TTTAAAAACA TTGTAAAGCT TTGGGTCACT
GATAACGATG CCAATTCTGC ATACCAAGGT ACTGACGTTT TTGTGACTTC TACGTTAGTC
ACTCTAATTT CAAAGGGATA CATCGAAGGT ATGACATTTG ATGACTTACT TGATATCGTT
CAGGAAATTT ACGTGAAAGA CGATAAAAGT GCACATATTG TTGTTTGTGA ATTGTTGGCT
GGGATCCTCC TTGGCTCCAA GAATTTAAGG CCAGAGCTTG CAAAGAAGCG AGATGAATTC
GTCCCAGACT TTTTGAGAAA CATTCTTGAG AGCGATTTAT CTCCCGACAA CAAAGGAATC
TGGAATATAT TTGCATGGTG GATTCCCTCT CATATTGATT GTAGAAGATT TCCTGAAGTT
TTCGACGTCT TCACGGATAT GACAATCGAC CACACATCCG ATTCTGCCTT CAAAGAAGCC
ACTAAGATTA GTTACATTAG ATCTGTCGTT GCTGCAATTA CTTGGTGTTC CCCTAACCCT
GGTAAGATTA TGGATCTATG CCTAAAGAAC ATAAATCACA GATACGAGGC AGTTAGAACA
CAAATTGGTT CACTCATGGC AGTGATGTCA TTCCCATATT ATTCTGAATC AGTTGCAGAC
AGCTCTGAAT TTATTCAACG ATGTAAGAGT CAATCCGGTT TGTCATTATA CGATGTTGGC
GGAGATAACA AATTGATATC CTTGGTGCCA CAATTATTTG AACAAATTGA AAATTGGAGA
AAGGAAGTTC GAGAATTACC TCCACAAATT ATTTTGAGGT CGGACTATAT TTATGCTGCC
ACAACAGTCC TCACTTGGTT GAGGCAGGAG CTAAATACGA GCATTTCAGT CTTGTTTCAA
CCGTACGTGA CAAAGTATTT GGTGCCATTC CTACTCGAAT TAATTAACAT GAAGGAAGTA
TGTCAATTGG GAAATATTGA CCCTATTTCA GTTGTGAAGA AGGTTTCTCA AATACCGTAT
TCAAAGAAGC ACCTCGATGA CATTGTGCAG ATGCTCGAAA AGTATTCCAA AGAAGATTTG
AATATAATTC AGACTATTAT TGTTGGAGAA TTTACTGAAA CAATCTACTT TAAGAACTTA
TTCCTCTTTG ACAAATCACA GAGGAAGAGA ATCTTTGAAG TTACATACAA ATTGATGTAT
CACAAGAATG TAGAAATAAG AGAATTTGAG GCATCTACAT TATCTGGTTT AATCTACAGT
TCACCACCTG ACGAGGTTGA AGAAAGAGTG AACACATATA CCAAAGCTTT CAGCAAAGAG
ATTGACATCA TTAGAAAAAA ATATAGAAAG TCTGGTTACA AGAATATTTC CCCAGAGGAT
ACTATAATCC TTCATGGTGC AACGTTAGGG TTGGGAGCAT TGGTACATGC TTTCTCATTT
TCTTCTCCTC CTCCTAAATG GGTTCCTAGT ATTTTAACAA TTTTATCTAA TAAAGCGTCT
GGTATTCCTG GACTTGTTGG TAAGACGGCA AAGGAATCCT TAGGTAAGTT CAAGAAAAAC
AGACAGGACA CATGGCACAT TGATAGCAAG GTATTCAGTG AAAGTGAAAT GGAAGATTTG
GAAGGTGTTC TCTGGAAGAG TTATTTTATT TGA
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| Protein sequence | MVRRPSYSTI ESSRESHYNL DYPTDRKLLS ELQLDSSSRF YARSRKRTLD LPSLLPYATE
NPQDQAKFLS HIVSHLYIAI KTLDIQGSLS VSAKDIAALK DIAGLSDIDL ALETNLFEMN
ASSQDLAQTE GAEDENYLSV EYDTDTDHEG EDEEDDADED DGESEGAVQH KKSPKSAAVV
SVRTWTHELL VWLKMKYDMP VKLRMSLAKV YYAICLSRGQ HIGLKTYVKV FELLTKDVRL
LKQQHFKLDW KQLQQELSYH FPPVDTTLDQ FEKKEHKQIL RLAARASHFF PEDSLASIYK
KLGSQFSITN ASLVMSSMSL LPHTFVAGGE DNENDIRHYI PSFFYMWQKL SHASGFDAQV
TARLGVVAMS ALTKLNDDAS AGEYLKLGKF GIFTEDQMEY LINSLINSLS IMVEKYSSLK
TKYFHGFASA IVYSLNGSSA LEPHGLIYYL RTLLNAIESY VHPSNTGEWS RPISKLVLSL
IYQFHKRFNT ENEKAGVLHD LPVELKLSDE VVTEFVTMFL PIIRTGIQSK KSSATDDYLS
SVQLLAFLKP DMVLEYLLVD IYESLQGVIS THRVIIALRT IESLSRFFAS RPIFRVHVTT
ILQLALPGID TNDLEKTIHT LDVFASISNF APFHDLTNGY GDPAIASQFV QGHLEHLKAK
MYIEKEEIPF EVNHELELEA LKSSTSAFKR IMNSLSERLF TLLKNIPDPS KSDGIEKDLA
ESLPKFLYVL LESLSDDIFE SFRNEFFDFV LNNTYHTIAD VSAEICGGLI KRDPKSFKKY
SSIFIDRIIE EVEENGAGVS RTGVEILPRD QALFWNLVIL NECIGNAGTY VVDSSKKLMK
LSYFLMEHVK GPTVFSSSYL VNQMLQAVTK VRLNENRIIA PAYESKYGVD EKCWGAFQFD
EDRFSEEKTN FDWFIPTDKE ISFAVECFNG HVSKSLDNIS NLMKSFNKES HLDASKSLQL
SDELRMNLLY LGYCLSGVSY LLDPSFNEDI PKLNHQSESI QQHPDDQQEE EKEKITHFQD
QSYSAVREHF FASLGKSESL EMPITADISA RATPQIEGVD MSSMNPAITF RERKLYTSNY
YFGDDMENRK SSDLYLKLHK TYHLIGKSLH IICKFLTANF LDNTKIFKHF IYVANIWFAD
VGRERMLDSS HARINYGYVS SIQSINRVRK PFTRIAISAR LEAYHSLRVA LHATSRTQTD
LDRFLLEDIV KLSVSTYIAI AKSSQSLLLD AMKRLNGSYS VIVKSAFKYL TRALDENDHK
KIESGLSIFS LRRIKTHIRN DFFNVQKYVE LLLRCLDVDS VEVHNVAHAL YDGVFKSITP
PSSVCLIDHS EIDTIRPPDE FIDLEIKAVR FAKERKRKLY FDKLKKLENS VLAKEKSNSH
WKTTSLNLSL LINLQSYLEI PTSDEVLQLL AKEASRDHPT ISRLALKGVT RIVNKLNLLS
TLDYKLENAY DFNFVPKGLK LVDTRPKKGE SYFVDWRKEL RNVSEPTYFV DHKASTGWLF
WNDAMPVIAA GPVIKMSLEV SDELALKGFS SYVSKEWFKN IVKLWVTDND ANSAYQGTDV
FVTSTLVTLI SKGYIEGMTF DDLLDIVQEI YVKDDKSAHI VVCELLAGIL LGSKNLRPEL
AKKRDEFVPD FLRNILESDL SPDNKGIWNI FAWWIPSHID CRRFPEVFDV FTDMTIDHTS
DSAFKEATKI SYIRSVVAAI TWCSPNPGKI MDLCLKNINH RYEAVRTQIG SLMAVMSFPY
YSESVADSSE FIQRCKSQSG LSLYDVGGDN KLISLVPQLF EQIENWRKEV RELPPQIILR
SDYIYAATTV LTWLRQELNT SISVLFQPYV TKYLVPFLLE LINMKEVCQL GNIDPISVVK
KVSQIPYSKK HLDDIVQMLE KYSKEDLNII QTIIVGEFTE TIYFKNLFLF DKSQRKRIFE
VTYKLMYHKN VEIREFEAST LSGLIYSSPP DEVEERVNTY TKAFSKEIDI IRKKYRKSGY
KNISPEDTII LHGATLGLGA LVHAFSFSSP PPKWVPSILT ILSNKASGIP GLVGKTAKES
LGKFKKNRQD TWHIDSKVFS ESEMEDLEGV LWKSYFI
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