| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_44837 |
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| Symbol | TPP1 |
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| ID | 4838941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | + |
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| Start bp | 1746705 |
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| End bp | 1747376 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 12 |
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| GC content | 40% |
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| IMG OID | 640390256 |
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| Product | Three Prime Phosphatase 1 Polynucleotide kinase 3' phosphatase |
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| Protein accession | XP_001384287 |
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| Protein GI | 150865179 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0241] Histidinol phosphatase and related phosphatases |
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| TIGRFAM ID | [TIGR01662] HAD-superfamily hydrolase, subfamily IIIA
[TIGR01664] DNA 3'-phosphatase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | AAAGACTTTT CTTCCAGATG GAAAATAGTT GGAAATCATC TAATCTGCAA TTTGCCGGAA
AATACAGAAT TTCTCCGTAA TTATCACTCC GTTCTGAACC TGAAATCCAT CAAAGTTGCA
GCCTTTGATC TAGACGGAAC ACTCATAGAT ACCAAGTCAG GACAGAGGTT TGCGCGTACG
GCTGATGATT GGCGGTTCTG GCTGCCTGAT AGCAAGACGG AATCGAAAGT TTTAGAAAAA
CTAGCAGATC TTATAAAAGA AAAGTATCTT ATAGTGGTGT TCACGAACCA AGGTGGAGTA
ATAGCCAACA TTGCTAACAA GTCATACAAT AACTTCATTC AACGAGTCAA TTCTGTAGCC
GCCAAATTGA GCGATTTCAT AAATGGAAAT GAAACTGAGC TTTTGGTATT TGCTTCTCCG
AAAAAGCCTG GTGGGAAAAC AGTACTAGTT TCTACAGACG AACAATTCAA GTCCATGAGA
AAACCGGAAT CAGGAATGTG GACTGAATTA ACGCAGTTTC TTCAAAAAAG TTCCGGATTG
GATGTAGATA TCCACAATAG TATTTATGTT GGAGATGCTG CTGGAAGAGT TAAAGACTTC
CTGGACAGCG ATGCCATGTT CGCAAAGAAC ATTAATTGTA CATTTAAGAC TCCTGAGGAG
TTCTTCGGTT GA
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| Protein sequence | KDFSSRWKIV GNHLICNLPE NTEFLRNYHS VSNSKSIKVA AFDLDGTLID TKSGQRFART
ADDWRFWSPD SKTESKVLEK LADLIKEKYL IVVFTNQGGV IANIANKSYN NFIQRVNSVA
AKLSDFINGN ETELLVFASP KKPGGKTVLV STDEQFKSMR KPESGMWTEL TQFLQKSSGL
DVDIHNSIYV GDAAGRVKDF SDSDAMFAKN INCTFKTPEE FFG
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