Gene PICST_44648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_44648 
Symbol 
ID4838435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp1207425 
End bp1207814 
Gene Length390 bp 
Protein Length129 aa 
Translation table12 
GC content43% 
IMG OID640389750 
Productpredicted protein 
Protein accessionXP_001384186 
Protein GI126135324 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0689191 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTTT TAACTACCAA CTTTGTCAAA TGTGCCGTCA AAGGATGTCA ATCTTCTACT 
GAATCATTCC CTTTGAAATA TTCAGACTGC CAGTTGGTGC AAGAAGAACA AGAATATAAC
CCAGAATTTC TCGTACATAT GTTGGAAAGA CTAGACTGGA ACGCTGTTAT ACAAGTAGCC
AGAGACTTGG GCAACGATTC GTTACCTCCA ACTAAGCCTG ACAGCTTGGA CCCAATCATG
GAAGAAGACC AGGCTGTCTT GAAAGACTTG CATACCTTGT TGGTGGAAAC TCAAATAGTC
GAAGGACGTA TGACGTGCAA CAACTGCCAG CACGTCTACC ACATCAAAAA CTCCATCCCT
AACTTCTTGC TCCCTCCTCA TTTGTGCTAG
 
Protein sequence
MKFLTTNFVK CAVKGCQSST ESFPLKYSDC QLVQEEQEYN PEFLVHMLER LDWNAVIQVA 
RDLGNDSLPP TKPDSLDPIM EEDQAVLKDL HTLLVETQIV EGRMTCNNCQ HVYHIKNSIP
NFLLPPHLC