Gene PICST_44456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_44456 
SymbolOYE2.5 
ID4838572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp495450 
End bp496670 
Gene Length1221 bp 
Protein Length406 aa 
Translation table12 
GC content43% 
IMG OID640389887 
ProductNADPH dehydrogenase 
Protein accessionXP_001384054 
Protein GI126135060 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.775957 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCCG TCAAAATTTC TCCATTGAAA GATTCCGAAG CATTCCAGTC TATCAAAGTT 
GGTAACAACA CTCTTCAAAC CAAGATTGTC TATCCACCAA CTACTAGATT TAGAGCTTTA
GAAGACCACA CTCCTTCTGA CTTACAATTG CAGTACTATG GCGACAGATC CACTTTCCCA
GGTACTTTGC TTATAACTGA AGGTACTTTT GTCTCTCCTC AAGCCTCTGG TTATGAAGGT
GCGCCAGGTA TTTGGACTGA CAAGCATGCT AAAGCATGGA AGGTTATTAC TGATAAGGTT
CATGCCAATG GCTCTTTCAT TTCAACCCAG TTCTGGTTTT TGGGCAGAGT TGCAGATCCA
GCTGTTATGA AGACCCGTGG GTTGAATCCA GTTTCTGCCT CTGTTACTTA TGAAAGTGAT
GCCGCTAAAG AAGCTGCCGA AGCTGTTGGT AACCCAGTTA GAGCTTTGAC TACCCAGGAA
ATCAAGGATC TTGTTTACAA GACTTACACC AACGCTGCTC AGAAGGCCAT GGATGCTGGT
TTCGACTACA TTGAACTCCA TGCCGCACAC GGTTACCTTT TAGATCAATT TTTGCAACCT
TGCACCAATC AAAGAACTGA TGAATACGGT GGATCCATTG AGAACAGAGC CAGATTAATA
CTTGAGTTGG TTGACCATTT GTCTACCATT GTCGGTGCTG ACAAGATTGG TATCAGAATC
TCTCCATGGG CTACTTTCCA AAACATGAAG GCTCATAAGG ACACTGCTCA CCCATTGACT
ACTTTCTCTT ACTTGGTTCA CGAATTGCAA CAGAGAGCTG ACAAGGGTCA AGGTATTGCC
TACATTTCAG TCGTTGAGCC TCGTGTCAGT GGAATCCTTG ACGTCTCTGA AGAAGACCAA
GCTGGTGACA ACGAATTTGT TTCCAAGATC TGGAAGGGTG TTATCTTAAA AGCCGGTAAC
TACTCGTACG ATGCTCCAAC ATTCACCACT TTGAAGGAAG ACATTGCTGA CAAGCGGACA
TTAGTTGGCT TCTCCAGATA CTTCACCTCG AATCCTAACT TGGTTTGGAA ATTACGTGAT
GGAATTGACT TGGTGCCATA TGACAGAGAC ACGTTCTACG GTGACAGTAA CTATGGTTAC
AATACCTATT CTATGGCTCC CGAAGAGGTT GATAAAGAAT TAGAAATCAA GAGACTTGCT
TCAGCCATTG AAGTTTTGTG A
 
Protein sequence
MSSVKISPLK DSEAFQSIKV GNNTLQTKIV YPPTTRFRAL EDHTPSDLQL QYYGDRSTFP 
GTLLITEGTF VSPQASGYEG APGIWTDKHA KAWKVITDKV HANGSFISTQ FWFLGRVADP
AVMKTRGLNP VSASVTYESD AAKEAAEAVG NPVRALTTQE IKDLVYKTYT NAAQKAMDAG
FDYIELHAAH GYLLDQFLQP CTNQRTDEYG GSIENRARLI LELVDHLSTI VGADKIGIRI
SPWATFQNMK AHKDTAHPLT TFSYLVHELQ QRADKGQGIA YISVVEPRVS GILDVSEEDQ
AGDNEFVSKI WKGVILKAGN YSYDAPTFTT LKEDIADKRT LVGFSRYFTS NPNLVWKLRD
GIDLVPYDRD TFYGDSNYGY NTYSMAPEEV DKELEIKRLA SAIEVL