Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_36090 |
Symbol | |
ID | 4838788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | - |
Start bp | 1646366 |
End bp | 1647892 |
Gene Length | 1527 bp |
Protein Length | 508 aa |
Translation table | 12 |
GC content | 47% |
IMG OID | 640390103 |
Product | predicted protein |
Protein accession | XP_001384620 |
Protein GI | 150865414 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1362] Aspartyl aminopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGAAGA AGTTGTCCAC GGCAATTGAA GCTACTTCCG CTGGTTCCAG CTCCAGTTCT ACTGCTTCTA CTGCTAGTGC TCCAGCTCCT ACTCCTGTTT CTACCAGTAC TTCCAAGTAC TCTGACGATT ACTACGAAGC CCATGCTGAC GAATACATTA ATTTCACCTA TAAGTCGCCA ACCATCTACC ATGTGGTGGA CTACTTTGGA AGCAAGCTTG AACATGCTGG CTTTCTGTTC ATTTCTGAAA AGGAATCGTG GGACTCGATT AGACCTGGAA AGTACTACAC TGTCAGAAAC GGCTCTGCTT TAGCCGCGTT CATAGTTGGT GAACACTGGA AGCCCGCTAA GGGTGTTGGA ATCATTGGTT CGCACATCGA TGCGCTTACA GTGATTTTAA AGCCCAACTC TACCAAAGCC AAAGTAGAAG GTTACGAGCT TTTGGGTGTA GCCCCATACG CCGGTACTTT GGGCGATGTA TGGTGGGATA GAGACCTTGG GGTAGGTGGT AGATTGCTTG TGAAAGACAG TACTGGCAAG GTTGTGCCAC AGCTTGTAGA CTCTACCCCT AACCCTATTG CCCATATTCC TACTTTAGCA CCTCACTTTG GAGCTCCAGC TGTGGGTCCT TTCAACAAGG AAACGCAGGC CGTTCCCGTG GTTGGTTTCT CCACTGAAGA CCCAGAAGAA CCCACCGAAG AAGAAAAGTC CGCTCCTTTA TTTGGCAAAC ACCCTATGAC CTTGTTGCGT TACATTGCCA AAAAGGCCAA CGTCAAGGTT TCGGACATTG TCCAATGGGA CTTGCAATTG TACGACATCC AGAAGGGTGT CAAAGGAGGT TTGAATAAGG AGTTTGTTTT TGCACCCAGA ATTGACGACA GAGTCTGTTC CTTCGCAGCC ATCAACTCGT TGATTGAAGT CGATAACGAC CATTTGCTCA AGTCGGACTC GTTCTCGCTC GTGGGTCTTT TCGACAACGA GGAAATCGGT TCGGCAACTC GTCAAGGTAT CAAGGGTGGT TTGACTGAAT CTGTCATCAC TAGAGTCATC TCGTCTAACT ACTTCAACCC TAAATCCTAC GATGTTCAGG AACAAATCCG TTTGACTTAT GCCAACACCA TCATCTTGTC AGCTGACGTC AACCACTTGC TCAACCCCAA CTTTGCCAAC GTTTATTTGG AGCACCACAA GCCTGTTCCC AACACTGGTG TCACCATTGC CTTGGACCCT AACGGACACA TGGCTACCGA CTCCACTGGT TTAGCTCTTG TTGAAGAATT GGCCAAACTC AACGGCGATA CGTTGCAATA TTTCCAGATC AGAAATGACT CCAGATCTGG TGGTACCATT GGCCCTTCAA TTTCGTTGCA GACCGGAGCC AGAACCATCG ACTTAGGTAT CCCTCAACTC TCGATGCATT CTATCAGAGC TACTGTTGGT ACCAAGGATA TCGGTTTGGG AGTCAAGTTC TTTGCTGGTT TCTTTTCCAA TTGGAGAAAG ACCTACGACA GCTACAAGGA CTTGTAA
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Protein sequence | MLKKLSTAIE ATSAGSSSSS TASTASAPAP TPVSTSTSKY SDDYYEAHAD EYINFTYKSP TIYHVVDYFG SKLEHAGFSF ISEKESWDSI RPGKYYTVRN GSALAAFIVG EHWKPAKGVG IIGSHIDALT VILKPNSTKA KVEGYELLGV APYAGTLGDV WWDRDLGVGG RLLVKDSTGK VVPQLVDSTP NPIAHIPTLA PHFGAPAVGP FNKETQAVPV VGFSTEDPEE PTEEEKSAPL FGKHPMTLLR YIAKKANVKV SDIVQWDLQL YDIQKGVKGG LNKEFVFAPR IDDRVCSFAA INSLIEVDND HLLKSDSFSL VGLFDNEEIG SATRQGIKGG LTESVITRVI SSNYFNPKSY DVQEQIRLTY ANTIILSADV NHLLNPNFAN VYLEHHKPVP NTGVTIALDP NGHMATDSTG LALVEELAKL NGDTLQYFQI RNDSRSGGTI GPSISLQTGA RTIDLGIPQL SMHSIRATVG TKDIGLGVKF FAGFFSNWRK TYDSYKDL
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