Gene PICST_3603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_3603 
Symbol 
ID4839035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp661442 
End bp662611 
Gene Length1170 bp 
Protein Length390 aa 
Translation table12 
GC content40% 
IMG OID640390350 
Productpredicted protein 
Protein accessionXP_001384423 
Protein GI150865275 
COG category[D] Cell cycle control, cell division, chromosome partitioning
[Z] Cytoskeleton 
COG ID[COG5019] Septin family protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.137425 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.150378 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATAGATGAAA ACTGGAAAAT TGGTCTTTCC TATCTTCCTC TCCAGAGTAA GGAATTGGCA 
TCTAGAAAGG GAGCCAAGTT CACTCTCATG GTTGCTGGTC AAGAAGGAAC TGGCAAATCC
ACTTTTCTTA ACACTCTTTT TGGGTGCGAT TTGGTACATG CTCTGGACAC AAATAACAGA
GGAACTGCAA ATATTGATGT CAATACCTAC AAGTTAGTCG AAGATACATT TCAGTTGGAA
TTAACTACTG TGGACACACC TGGATTTGGA AAGAACACCA ATAACCAATT TGACTGGGCT
CCTATTACTG ACTACATTGA TGAGCAATTT AGGTTGTATC TCTTCCAATC AGAGCAACCT
GAAAGAATTA AGAGAGAAGA TAATAGGGTC CATGTCTGTT TGTACTTCAT TGTCCCTACT
CTCTGTGGAT TGAAGCCCTT GGATGTCATT GCCATGAGAG AGCTCTCCTC AAGGGTCAAC
CTTATCCCTG TTATCAGTAA GGGAGATACG CTCAACAAGA ATGAGTTGAG GCAGTTCAAA
GATATGGTCA AAATGACATT GAGTCTGCAA GATATCAATG TCTGCGATCT TATTCTTGAT
TCTCAGGTCT CTGCCAAAAT CAATTCCCAG GTGCCATTCT CTATAATCGG CTCCAACTTG
TACTATGTTA ACGAAAAGGG AGAAATGGTT AGAGGAAGAA AGTACCCTTG GGGGGTAGCT
GAAGTTGAAA ATGAAGAACA CTGTGATTTT GTGCAGCTCC GCAAGATTCT CATGAGCGAA
AATATGCTTG ACTTAATTAA TTCCACTGAA GTTCATTATG AAAACTACAG AAGAAACAGT
CTTCATTTCA GATTCGTGGA AAGCGCTAAC CTGGGATATA CTTCAAATCT TGGCGATTTA
TCGAAAATCG ATGGTTTTCA AGAGTTAAAG ATTTACAACA GAATTCCTCT AACGGTACTT
GAAGAAAACA TAAGAAACAA GCATCCATCA ATTCCTTATT ACGAGAAGAA AATTAGAGCA
GGTTTGTCTG GTATTGTAAG CAACCAGGAG CTGCGCTTCA GAGAATGGAA ATCAGCCTTA
GTCAAGAAAC AAGATGTGTT GAACAGAGAT ATCGAGCATA TTCACGACAA ATTGATCAAG
TTGCAAGAGT TGGTATCCAG GTTGGAAACG
 
Protein sequence
IDENWKIGLS YLPLQSKELA SRKGAKFTLM VAGQEGTGKS TFLNTLFGCD LVHASDTNNR 
GTANIDVNTY KLVEDTFQLE LTTVDTPGFG KNTNNQFDWA PITDYIDEQF RLYLFQSEQP
ERIKREDNRV HVCLYFIVPT LCGLKPLDVI AMRELSSRVN LIPVISKGDT LNKNELRQFK
DMVKMTLSSQ DINVCDLILD SQVSAKINSQ VPFSIIGSNL YYVNEKGEMV RGRKYPWGVA
EVENEEHCDF VQLRKILMSE NMLDLINSTE VHYENYRRNS LHFRFVESAN SGYTSNLGDL
SKIDGFQELK IYNRIPLTVL EENIRNKHPS IPYYEKKIRA GLSGIVSNQE SRFREWKSAL
VKKQDVLNRD IEHIHDKLIK LQELVSRLET