Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_35868 |
Symbol | ARG3 |
ID | 4838442 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | + |
Start bp | 606416 |
End bp | 607438 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640389757 |
Product | ornithine carbamoyltransferase |
Protein accession | XP_001384080 |
Protein GI | 150865030 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0078] Ornithine carbamoyltransferase |
TIGRFAM ID | [TIGR00658] ornithine carbamoyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.839988 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0132286 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTATGA CCGTTAAATC TGCTAGCAGT AAGAGATTTT TTTCCGCTAC CACCTTGAAG AGCCAGAAAC CTCGTCATTT GGTGAATATG ATACAATTGA ACAACGAGGA GTTGGCTTCT TTGGTGAATA AGGCTGCTGG ATTCAAAAAA ATCGTCAGAT CTGGCGAAAC ATCACCAGTA AACCATCAGA AGCTCTTGGG GAAATTGGTC GCCCTTTTGT TTTCCAAGAG ATCTACCAGA ACCAGAATCT CTACCGAAGG TGCTGCAGCC TTCTTTGGAG CGCAACCTAT GTTTTTAGGT AAGGATGACA TCCAATTGGG AGTTAACGAA TCGATGTATG ACACCACAAA AGTGATCAGT TCCATGACTT CGTGTATCTT TGCCAGAGTC AACAGACACC AGGACATTCT TGACTTGTGT AAGGACTCCT CTGTTCCTAT TATCAACTCG TTGTGTGACA TGTACCATCC ATTGCAAGCC ATTACTGACA TTCTTACTAT TAAAGAAGCC TTTGGCAAGA CTCAGGGCTT GAAGCTTGCC TGGATCGGAG ATTCCAACAA TGTGATTAAT GATTTGGCAA TTGCATCGTT GAGACTGGGC ATTGATGTTT CTGTTTCAAT TCCACAAGGT GTCGAGTTCG ATACTGAAGT CGGCAATAAG GCTCACGAAA TAGCTAAGGA ACAAAATTTG CTGTTTGAAG TTGTCCACGA CCCTGCCGTA GCCTTGAAGA ACGCCGATGT CATAGTCACT GATACCTGGA TTTCCATGGG ACAAGAAGAA GAAAAGATCG AGAAGTTGAA GCAGTTTGCT GGTTACCAGA TCACCCCAGA GATGATTGCA AACGGTCAAG CCAACAGCAA CTGGAAGTTC ATGCATTGTT TGCCCAGACA TCAGGAAGAA GTAAACGACG ATGTTTTCTA TAGCGACCGT TCTCTTGTGT TTGAAGAAGC TGAAAACAGA TTGTATGCTG CAATGGCTGT GATCGAAGCA TTTGTCGTGA ACAAGGGAGA TTTATTGAAG TAA
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Protein sequence | MIMTVKSASS KRFFSATTLK SQKPRHLVNM IQLNNEELAS LVNKAAGFKK IVRSGETSPV NHQKLLGKLV ALLFSKRSTR TRISTEGAAA FFGAQPMFLG KDDIQLGVNE SMYDTTKVIS SMTSCIFARV NRHQDILDLC KDSSVPIINS LCDMYHPLQA ITDILTIKEA FGKTQGLKLA WIGDSNNVIN DLAIASLRSG IDVSVSIPQG VEFDTEVGNK AHEIAKEQNL SFEVVHDPAV ALKNADVIVT DTWISMGQEE EKIEKLKQFA GYQITPEMIA NGQANSNWKF MHCLPRHQEE VNDDVFYSDR SLVFEEAENR LYAAMAVIEA FVVNKGDLLK
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