Gene PICST_35868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_35868 
SymbolARG3 
ID4838442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp606416 
End bp607438 
Gene Length1023 bp 
Protein Length340 aa 
Translation table12 
GC content43% 
IMG OID640389757 
Productornithine carbamoyltransferase 
Protein accessionXP_001384080 
Protein GI150865030 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0078] Ornithine carbamoyltransferase 
TIGRFAM ID[TIGR00658] ornithine carbamoyltransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.839988 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0132286 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTATGA CCGTTAAATC TGCTAGCAGT AAGAGATTTT TTTCCGCTAC CACCTTGAAG 
AGCCAGAAAC CTCGTCATTT GGTGAATATG ATACAATTGA ACAACGAGGA GTTGGCTTCT
TTGGTGAATA AGGCTGCTGG ATTCAAAAAA ATCGTCAGAT CTGGCGAAAC ATCACCAGTA
AACCATCAGA AGCTCTTGGG GAAATTGGTC GCCCTTTTGT TTTCCAAGAG ATCTACCAGA
ACCAGAATCT CTACCGAAGG TGCTGCAGCC TTCTTTGGAG CGCAACCTAT GTTTTTAGGT
AAGGATGACA TCCAATTGGG AGTTAACGAA TCGATGTATG ACACCACAAA AGTGATCAGT
TCCATGACTT CGTGTATCTT TGCCAGAGTC AACAGACACC AGGACATTCT TGACTTGTGT
AAGGACTCCT CTGTTCCTAT TATCAACTCG TTGTGTGACA TGTACCATCC ATTGCAAGCC
ATTACTGACA TTCTTACTAT TAAAGAAGCC TTTGGCAAGA CTCAGGGCTT GAAGCTTGCC
TGGATCGGAG ATTCCAACAA TGTGATTAAT GATTTGGCAA TTGCATCGTT GAGACTGGGC
ATTGATGTTT CTGTTTCAAT TCCACAAGGT GTCGAGTTCG ATACTGAAGT CGGCAATAAG
GCTCACGAAA TAGCTAAGGA ACAAAATTTG CTGTTTGAAG TTGTCCACGA CCCTGCCGTA
GCCTTGAAGA ACGCCGATGT CATAGTCACT GATACCTGGA TTTCCATGGG ACAAGAAGAA
GAAAAGATCG AGAAGTTGAA GCAGTTTGCT GGTTACCAGA TCACCCCAGA GATGATTGCA
AACGGTCAAG CCAACAGCAA CTGGAAGTTC ATGCATTGTT TGCCCAGACA TCAGGAAGAA
GTAAACGACG ATGTTTTCTA TAGCGACCGT TCTCTTGTGT TTGAAGAAGC TGAAAACAGA
TTGTATGCTG CAATGGCTGT GATCGAAGCA TTTGTCGTGA ACAAGGGAGA TTTATTGAAG
TAA
 
Protein sequence
MIMTVKSASS KRFFSATTLK SQKPRHLVNM IQLNNEELAS LVNKAAGFKK IVRSGETSPV 
NHQKLLGKLV ALLFSKRSTR TRISTEGAAA FFGAQPMFLG KDDIQLGVNE SMYDTTKVIS
SMTSCIFARV NRHQDILDLC KDSSVPIINS LCDMYHPLQA ITDILTIKEA FGKTQGLKLA
WIGDSNNVIN DLAIASLRSG IDVSVSIPQG VEFDTEVGNK AHEIAKEQNL SFEVVHDPAV
ALKNADVIVT DTWISMGQEE EKIEKLKQFA GYQITPEMIA NGQANSNWKF MHCLPRHQEE
VNDDVFYSDR SLVFEEAENR LYAAMAVIEA FVVNKGDLLK