| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_35812 |
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| Symbol | |
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| ID | 4838817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | - |
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| Start bp | 391143 |
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| End bp | 392408 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640390132 |
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| Product | predicted protein |
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| Protein accession | XP_001384371 |
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| Protein GI | 126135694 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1736] Diphthamide synthase subunit DPH2 |
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| TIGRFAM ID | [TIGR00322] diphthamide biosynthesis protein 2-related domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0979008 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGGAAG CTATTGAAAC CAGCAAGAAA GTACCGAGAA GACGTTTTGT GGGAAAGAAA
CCTGGAGCAC CTGATGAATC TTCTGAAAAT GGATCTGCTT TAGTTTCTTC TACCAAGAAC
AAACATCTAG GGAGAGTCAT GAACCAGATC CCTGACGATA TTTTGAACGA CAAGGAGTTG
AATGAAGCGA TAAAGCTTTT GCCATCGAAT TACAACTTTG AAATTCAGAA GACTGTATGG
AATATCAAAA AACATGGCGC CAAAAGAGTT GCTCTCCAGA TGCCCGAAGG CTTGCTAATC
TACTCATTGA TCATTTCTGA TATCTTGGAG CAGTTCTGTG AAGTCGAAAC TGTAGTGATG
GGAGATGTAT CATATGGTGC GTGTTGTATC GACGACTATA CGGCTAGATC ACTTGATTGT
GACTTCATTG TTCATTATGC CCATTCATGT TTGGTTCCTA TAGACATCAC TGCCATCAAG
GTGTTGTACG TTTTTGTCAC CATCAACATC GATGAATCCC ATTTGATCAA CACGATCAAG
TTAAACTTCG ACCAAGGCTC GCAATTAGCT GTGTTTGGTA CTATTCAGTT CAACCCCACT
ATTCACAGCG CGAAAGCCAA ACTAGAGAGC GATTCAGAGA AACCTATATA CTTAATACCT
CCCCAGACTA GACCTCTTTC CAAGGGTGAA GTATTGGGCT GCACATCGGC CAGACTCAAC
AAGGATCATA TAAGCGGAAT GATATACATC GGAGATGGCC GTTTCCACTT GGAAAGTTCC
ATGATCCACA ACCCAGAAAT CCCAGCATAT AGATACGACC CTTACTCAAG AAAGTTCACC
AGAGAGTATT ACGACCAGAA GGAAATGATC CAGGTAAGAG ACGATGCCAT AAAGACAGCA
TCAAAAGCAA AGAAGATAGG CCTCATACTC GGAGCTCTTG GAAGGCAAGG AAACCCCGTA
ACTCTAGACA AGCTTGAGCA ATCGTTATCT TCTCGAGGCA TTCAGGTAGT CAAGATCATC
TTGAGTGAAA TTTTTCCTCA GAAGCTTTCG ATGTTTGATG ATGTAGACGC CTTTGTGCAA
GTGGCCTGCC CCAGATTATC TATAGACTGG GGTTACGCCT TCAACAAGCC GCTACTAACT
CCTTACGAGG CTATGGTGAT GCTAGAACAA GATACTAAAT GGAGTGAAAA GTATTATCCT
ATGGATTACT ATGCTAAGGA CGGCTATGGA CGAGGAAAAA TCCCCGACCA TATCAACGTT
ATATAA
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| Protein sequence | MVEAIETSKK VPRRRFVGKK PGAPDESSEN GSALVSSTKN KHLGRVMNQI PDDILNDKEL
NEAIKLLPSN YNFEIQKTVW NIKKHGAKRV ALQMPEGLLI YSLIISDILE QFCEVETVVM
GDVSYGACCI DDYTARSLDC DFIVHYAHSC LVPIDITAIK VLYVFVTINI DESHLINTIK
LNFDQGSQLA VFGTIQFNPT IHSAKAKLES DSEKPIYLIP PQTRPLSKGE VLGCTSARLN
KDHISGMIYI GDGRFHLESS MIHNPEIPAY RYDPYSRKFT REYYDQKEMI QVRDDAIKTA
SKAKKIGLIL GALGRQGNPV TLDKLEQSLS SRGIQVVKII LSEIFPQKLS MFDDVDAFVQ
VACPRLSIDW GYAFNKPLLT PYEAMVMLEQ DTKWSEKYYP MDYYAKDGYG RGKIPDHINV
I
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