Gene PICST_35800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_35800 
Symbol 
ID4838946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp324323 
End bp325117 
Gene Length795 bp 
Protein Length264 aa 
Translation table12 
GC content46% 
IMG OID640390261 
Productpredicted protein 
Protein accessionXP_001384362 
Protein GI126135676 
COG category[S] Function unknown 
COG ID[COG1584] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATCCA TCGAGTCAAA TGCTTCCAAC AATAAAGCTG AAAGTTTGTC CAACGACGAC 
TCAGTGCCCT ATAAAACTGT CACCTACTCC GGAGAAGGCA ATGAATATGT TATCATCGAC
GGTAAGAAAT ACTTGAGACA TGAATTGATG ACTGCCTTCG GTGGTACCTT CAATCCTGGT
TTGGCACCCT ACCCTAAGCA TCAATTCGGT AATGCTGCTG CCCTTGGTTT GGCCTCTTTC
GCAGTTACCA CTATGGTTCT CGGTTTGTTC TACTCGGGGG CTATGGGCAT CAGTACTCCT
AATGTCGTTG TTAGTATGTG TGTTTTCTAC GGTGGTGCTG TTGAACTCCT TGCCGGAGTT
TGGGAGATGG CCATTGGTAA CACTTTTGCC GGCACTGTAT TCGTTTCTTT TGGAGCCTTT
TGGATTTCTT TCGGTGTAAT ATTCATTGAA GCCTTTGGCA TTGCATCAGC CTATGCTGAT
GACCCAGCCC AATTTGGCAA TGCTGTAGGT ATTTATCTTA TTGGCTGGGC GTTTTTCACC
TTCATGATGT TGACTCTTGT GTTGAAGGCT ACTTGGCCAT TCATTGCCTT ATTTGTCACT
TTGGATACTG CCTTTATCTT GTTAGCTGCC GGTAACATGA CAGGAAACGC CCATGTCGTC
AAAGCAGGCG GAATTTTTGC ATGTATCACT GCTTCGTGTG GATTCTGGAT TATGTATGCG
GGTGTTTCTG TTCCTACCAA CAGCTACCTC CATCTTCCAG TGATGCAGGT GCCTATCATT
GGCTCCAAGA GATAG
 
Protein sequence
MSSIESNASN NKAESLSNDD SVPYKTVTYS GEGNEYVIID GKKYLRHELM TAFGGTFNPG 
LAPYPKHQFG NAAALGLASF AVTTMVLGLF YSGAMGISTP NVVVSMCVFY GGAVELLAGV
WEMAIGNTFA GTVFVSFGAF WISFGVIFIE AFGIASAYAD DPAQFGNAVG IYLIGWAFFT
FMMLTLVLKA TWPFIALFVT LDTAFILLAA GNMTGNAHVV KAGGIFACIT ASCGFWIMYA
GVSVPTNSYL HLPVMQVPII GSKR