Gene PICST_35750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_35750 
SymbolPRO3 
ID4838804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp105023 
End bp105856 
Gene Length834 bp 
Protein Length277 aa 
Translation table12 
GC content47% 
IMG OID640390119 
Productdelta 1-pyrroline-5-carboxylate reductase 
Protein accessionXP_001384320 
Protein GI126135592 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0345] Pyrroline-5-carboxylate reductase 
TIGRFAM ID[TIGR00112] pyrroline-5-carboxylate reductase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTTGA AAGACTACAC CATTACCGTT TTGGGCTGTG GAGTGATGGG CACGGCCGTT 
TCTTCAGCCA TTCTCAAATC CAAGGTTGAA CCCTTTCCAG CTAAGCTTAT TGCCTGCAAC
ACAACTGAAG CAGCAGCTAC TTTGGCTCTA GAGACTTTGA ACAGCCCCAT CGTTGAGCAT
TCGTTCGGCT TGGAATCGAA CAGAAAGGCT GTCTCCCAAG CCGACGTTAT TATCCTTGCT
TGTAAGCCAT TCATGTACCA GACTATTTAT GATGAGGTCA AGGACTCTTT GACTGGAAAA
CAGTTGCTCA TTTCTTTATT GGCTGGAACT ACTATCTCTG AATTGACAAT TTTCACCCCC
TATGTGGCCA AGGTTATGAC CAACACCCCA GCGCGTTTCG GATGTGGTAC TGCTGGTATT
TCGTTTTCGC CAGAAGCTGA AGCTAAGTAC GAAGACTTGG TGTTGAAGTT GATTGGCACT
GTTGGAGAGG CATTCAAGAT CCCCGAAAAG AACATGGACG CCGCAACTGC GCTCATTGGC
TCTGGTCCAG CCTTCTGTTT GTTAATGATG GAGTCTTTAA TTGACGGAGG TGTTCGTATG
GGCTTGCCAT TCGAAGTAGC CAAGTTATCT GCTGCCAAGG TCATGGAAGG TACTGCCAGA
ATGGTTCTTG AAACTGGAGA CCATCCTGCT GCATTGAAGA GTATGGTGTG TACACCTGGA
GGAACTACCA TCGGTGGTTT GTTGAAGATG GAAGACGCAG GTGTCAGGGC AGGTATTGCC
AGAGGTGTAG AAGAAGCTGC GGTGATCTCT GCTTCATTTG CAAAGAAGAA GTAA
 
Protein sequence
MTLKDYTITV LGCGVMGTAV SSAILKSKVE PFPAKLIACN TTEAAATLAL ETLNSPIVEH 
SFGLESNRKA VSQADVIILA CKPFMYQTIY DEVKDSLTGK QLLISLLAGT TISELTIFTP
YVAKVMTNTP ARFGCGTAGI SFSPEAEAKY EDLVLKLIGT VGEAFKIPEK NMDAATALIG
SGPAFCLLMM ESLIDGGVRM GLPFEVAKLS AAKVMEGTAR MVLETGDHPA ALKSMVCTPG
GTTIGGLLKM EDAGVRAGIA RGVEEAAVIS ASFAKKK