| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_31825 |
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| Symbol | |
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| ID | 4838412 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | + |
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| Start bp | 1770001 |
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| End bp | 1771588 |
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| Gene Length | 1588 bp |
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| Protein Length | 429 aa |
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| Translation table | 12 |
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| GC content | 39% |
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| IMG OID | 640389727 |
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| Product | predicted protein |
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| Protein accession | XP_001384294 |
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| Protein GI | 150865182 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3415] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.296717 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTTTC AATTTGAGGA CGGTCTTGGT AAGATAACCA ACGAACTGGG CAAGTACATG
GTCGACCATG GAGACTTGGA TGAATTAAAA CCTCTGGACG GCTTGATTAA TCTTCCAGCT
TATTTGAAAC GAAGATCTAA AGAAGAAATC TTAACGAAGC CACCTCATCT AAGAGAGGGG
TTAATGCAAA TCGATTCACT TGTTGGCGAC TCTGAAACTG ATTCATTCGA AGGAATGGAC
GAAGACAGTG ATGACGAAAT TATGAAAATG ATGGTACCCC AGCGCAGAAC AGTAGGTAGA
CTGGCTTTCT TGTTTGAGTC CGTAGATGAA ATCGATAGTC AACAATCAGG TGCCCACGCT
GAAGAAAAAG ATGCCAAAGA TAAGAAAGAT CCTTACAGAA AGTACACTCC AGAGCAAGTG
GCGGGATTTT TTGATGAAAT AACAAGGCAA GTAGGGTCCT CGGTTGCCAA AATAGCTCGT
TCTCATGGAA TACAAGAAAG CACTGCGCAA AGATGGGTAA GAGACTATAA AAAGTCCGAA
AAGTTGCCAT TTGATGTTGT AAGAGGCAGA AAGAAGAAGT CAAACAAATT GAATGAAACT
CACGAGGAAT TTCTTAAATC AAAACTTGTG GATGATTGTA CTATGTCTCT TGACATGATG
ATTTCTGACT TACTGGACCA CTTTGAAGGT CTTTGTGTGA GTAAATCAAC TTTGGGTCGG
TTTCTCAGCG ACAATGTTCA TTTCACATTC AAAAAGATCA GAAAGGAGCC AATTGCTCGA
AATACAGAGT GGATGATTGA CAAGCGGTAT GATTATGTTA GCCTTATAAA CAGATCTGAT
ATCGACTACT ACAGCAACTG TATTTTCATA GACGAGGCAG GTTTTCAAAT TGATATGTCT
CCTCTGTATG GGTGGGCTCC ATCTGGTGTT ACTCCCGTTT CTAGAGTAAG CGGAAAATCG
GAAAACAGAA CTGTAATGGG AGCTGTTAAC TCGAAGGGAG TTGTACAACT CAACTTGAAA
AAGCCGTTCA GGAACGTTGC AAAGAAGAGG AAGACTGCCT CAGCTAGAAG AGGTCAAGCA
AATGAAGATA GAGATGAATC AGTTGGCACT ACAGCAGGGC ATTTCAAATA TTTTGTTCTT
GATGTCCTTC TGACATTGGA TCTCTACCCT GAGTATAGGA ACTGCTATCT CATCATGGAC
AATGCAAGTA TTCACAAAAA TCCCTCTATT GAGAGAATAA TTCTAAGCAG AGGTTATAGA
TTGCAATACT TGCCTCCTTA TTCACCCGAT TTAAATCCTA TTGAAAATTT CTGGGGGCAA
TTGAAGAAGA GGTTGTCGAG AGCAAAGTTC CGCCAAGGAG AAGATTTGAG TTCACGTATT
CGAGAGGCTG TCTTATCTAT GCAAACGGAA CTTTTTCTGC AGAATGTCCA GCATTCAATT
GATTGTTTTC AGACTTGCTT GCGAAAAGAA CCACTTTAAA GTTTAGTTTT GAACTTCAAT
ATAGTCTTTT TGTATTTATG TTTACTTTTT CGTTATTTTT TTTAATACAG AAACAGGTAA
CTTTCTCTCT AAAGAAAAGC AAAATTGA
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| Protein sequence | MSFQFEDGLG KITNESGKYM VDHGDLDELK PSDGLINLPA YLKRRSKEEI LTKPPHLREG
LMQIDSLVGD SETDSFEGMD EDSDDEIMKM MVPQRRTVGR SAFLFESVDE IDSQQSGAHA
EEKDAKDKKD PYRKYTPEQV AGFFDEITRQ VGSSVAKIAR SHGIQESTAQ RWVRDYKKSE
KLPFDVVRGR KKKSNKLNET HEEFLKSKLV DDCTMSLDMM ISDLSDHFEG LCVSKSTLGR
FLSDNVHFTF KKIRKEPIAR NTEWMIDKRY DYVSLINRSD IDYYSNCIFI DEAGFQIDMS
PSYGWAPSGV TPVSRVSGKS ENRTVMGAVN SKGVVQLNLK KPFRNVAKKR KTASARRGQA
NEDRDESVGT TAGHFKYFVL DVLSTLDLYP EYRNCYLIMD NASIHKNPSI ERIILSRETG
NFLSKEKQN
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