Gene PICST_31752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_31752 
Symbol 
ID4838483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp1600924 
End bp1601859 
Gene Length936 bp 
Protein Length311 aa 
Translation table12 
GC content40% 
IMG OID640389798 
Productpredicted protein 
Protein accessionXP_001384611 
Protein GI150865408 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00893069 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCTCCAAT ATCACTTTCC AAGTGCCAGT GAGGTCAGAG TACCCCTGAA TTTGCCTCGA 
GAAGTTCTTC TTAGCAAGAA CTTGAAGATC GAAGCGGAGC AAAAACCAAA AGCTCCTCTC
TATACGAATA CTCCCATAAG CAAAAGCTTC AACACTAACG AACAAGAATA CGAAAATCCA
CTCAACGACA TACTACAAGA AAGTAGAAAA CTCATAAATG CCTATGTGTT GGCATACCCT
GAGACAAAAG AAAGCGAGCA ACAACCAGCT CCAAACCCCA AGAAGAACAG ATCTCGCAAA
TCCTCCAGCA AAAAAAAGAT TCGTGGAACA AAGAGAACCA GACTGCAAAA CGAAAGCTCA
CTTGAAGAAG TTATACAAGA AAAACAGAAC CTGCCCGAGC AAGATAGCTC AGCTTGCAAC
ACTCCAATTC CTAACAAGAC TATATATTTT TCACCATCCG GATCTTCGAA GAAAAAGCAC
CAGAACTTGC TACAATCCAC TCCTGTTTCA GTATTGAAAG AAGCTACCTT AAACCTCCAG
AAGTCAAATA AAGTCCTCAA GATAGATAAG GCTACACTAG TAACCAAATT GCAAGAAGAA
AGCCAAAAGG AAAACTTTTT GGCGGAAGCA ACTGCGGATG ATTCTGAATA CGACGATTTA
GCCTGTCACG CCGACAACAT CTTAAGAATG GCCGTAGATT CTACTATGTT GGGTTCCTTC
AATGGTTCCA TATCATCTTC GTTTTCAAAT ACTTTCGCTA ATGATTCTGT ATTAGGCATA
AAAATGAGAA AGAAGTATCC CGATATTTTG GATGATGATA TTGCCGACAA GAGTTTGCTC
GAGTTAAGGT CTTCAAGATG GAACACTTTG GACAGAATGA AGGCTTCCAA GATTGAAATT
AATGCTGAAG ATTTACAAGC TGCCGTTAAC GAATAA
 
Protein sequence
MLQYHFPSAS EVRVPSNLPR EVLLSKNLKI EAEQKPKAPL YTNTPISKSF NTNEQEYENP 
LNDILQESRK LINAYVLAYP ETKESEQQPA PNPKKNRSRK SSSKKKIRGT KRTRSQNESS
LEEVIQEKQN SPEQDSSACN TPIPNKTIYF SPSGSSKKKH QNLLQSTPVS VLKEATLNLQ
KSNKVLKIDK ATLVTKLQEE SQKENFLAEA TADDSEYDDL ACHADNILRM AVDSTMLGSF
NGSISSSFSN TFANDSVLGI KMRKKYPDIL DDDIADKSLL ELRSSRWNTL DRMKASKIEI
NAEDLQAAVN E