Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_31752 |
Symbol | |
ID | 4838483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | - |
Start bp | 1600924 |
End bp | 1601859 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 12 |
GC content | 40% |
IMG OID | 640389798 |
Product | predicted protein |
Protein accession | XP_001384611 |
Protein GI | 150865408 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00893069 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCTCCAAT ATCACTTTCC AAGTGCCAGT GAGGTCAGAG TACCCCTGAA TTTGCCTCGA GAAGTTCTTC TTAGCAAGAA CTTGAAGATC GAAGCGGAGC AAAAACCAAA AGCTCCTCTC TATACGAATA CTCCCATAAG CAAAAGCTTC AACACTAACG AACAAGAATA CGAAAATCCA CTCAACGACA TACTACAAGA AAGTAGAAAA CTCATAAATG CCTATGTGTT GGCATACCCT GAGACAAAAG AAAGCGAGCA ACAACCAGCT CCAAACCCCA AGAAGAACAG ATCTCGCAAA TCCTCCAGCA AAAAAAAGAT TCGTGGAACA AAGAGAACCA GACTGCAAAA CGAAAGCTCA CTTGAAGAAG TTATACAAGA AAAACAGAAC CTGCCCGAGC AAGATAGCTC AGCTTGCAAC ACTCCAATTC CTAACAAGAC TATATATTTT TCACCATCCG GATCTTCGAA GAAAAAGCAC CAGAACTTGC TACAATCCAC TCCTGTTTCA GTATTGAAAG AAGCTACCTT AAACCTCCAG AAGTCAAATA AAGTCCTCAA GATAGATAAG GCTACACTAG TAACCAAATT GCAAGAAGAA AGCCAAAAGG AAAACTTTTT GGCGGAAGCA ACTGCGGATG ATTCTGAATA CGACGATTTA GCCTGTCACG CCGACAACAT CTTAAGAATG GCCGTAGATT CTACTATGTT GGGTTCCTTC AATGGTTCCA TATCATCTTC GTTTTCAAAT ACTTTCGCTA ATGATTCTGT ATTAGGCATA AAAATGAGAA AGAAGTATCC CGATATTTTG GATGATGATA TTGCCGACAA GAGTTTGCTC GAGTTAAGGT CTTCAAGATG GAACACTTTG GACAGAATGA AGGCTTCCAA GATTGAAATT AATGCTGAAG ATTTACAAGC TGCCGTTAAC GAATAA
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Protein sequence | MLQYHFPSAS EVRVPSNLPR EVLLSKNLKI EAEQKPKAPL YTNTPISKSF NTNEQEYENP LNDILQESRK LINAYVLAYP ETKESEQQPA PNPKKNRSRK SSSKKKIRGT KRTRSQNESS LEEVIQEKQN SPEQDSSACN TPIPNKTIYF SPSGSSKKKH QNLLQSTPVS VLKEATLNLQ KSNKVLKIDK ATLVTKLQEE SQKENFLAEA TADDSEYDDL ACHADNILRM AVDSTMLGSF NGSISSSFSN TFANDSVLGI KMRKKYPDIL DDDIADKSLL ELRSSRWNTL DRMKASKIEI NAEDLQAAVN E
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