| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_31704 |
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| Symbol | SUV3 |
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| ID | 4838653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | + |
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| Start bp | 1480684 |
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| End bp | 1482606 |
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| Gene Length | 1923 bp |
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| Protein Length | 640 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640389968 |
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| Product | mitochondrial RNA helicase |
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| Protein accession | XP_001384238 |
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| Protein GI | 150865139 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00121417 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCGAC TCTATGACCA ATTTCAACAA CGACTGTTTT CTGGAGCTTA CGCTGGACTC
AATTCTGCTA CTCGTCAGGA AGCTGAATTG GTGCTTTCAA AATTGAAGCA ACGACTTTTC
AACGAATTCG GTGTATTCAC CAAGCTTTCA CACGAAGAGC AGTTAGCCAA AGTTAATGGG
TTGTCTCTAG TACAGTATAT GAACCCTCGA TTTGCCGATA TATGTCCGCT TATCTATCTG
ATAGATGCAG AAAAATATCC CAAAGGGTAC ATCGAATTCA ACGGCTTGGA GACCAAGATT
GACTTGTTAA CTCTCATTAT GACAAATCTT GTCTTCAAAG AGTACATGGT GTATAAGATA
GAAACATCCA AAAACACCGA CCAGGACTAT ATAGACTTAT CCAACCCTGC TCAGTGGTTT
CCTGAGGCCC GTAAGATGAA GAGAAAGATC GTAATGCATG TTGGTCCTAC CAACAGTGGA
AAGACATACA ATTCGTTGAA GAAGTTGGCT GAGGCTAAAA CTGGCTATTA TGCTGGACCA
TTGAGATTGT TGGCACGAGA GATTTACGAA AAGTTTCTTC TGACGAATGT CAGGTGTAAT
TTGATTACGG GAGAAGAAAT CATCCCCTGT ATGGATAAGT TTGGGAAAGT CAGTGGGATT
TCATCTGGAA CCATTGAAAT GATTCCCCTT CACAAGAAGA TGGATGTTTG TGTTATTGAT
GAAATTCAGA TGATAGCAGA TCCAGGAAGA GGATCTATAT GGACCAACGC TCTTTTGGGA
GTGTTAGCTA AAGAAATTCA CTTGTGTGGA GAAGAAAGTG CTGTGCCTTT AATCAAGAAG
TTGGCCAAGA TGACTGGTGA CGAAGTTGAA GTCAAGCAAT ATAAGCGACT AGGCGAGTTG
AAGGTGACTG ATAAGGCTAT CTCATATAAC AAGCTCGAGA AGGGTGATTG TTTGGTGGCA
TTTTCCAAAC ACAAGATCTT ACAGTTAAAG TGTGAAATTG AACGTAGAAC CAATCTCAGT
GTTGGTGTCG TTTATGGAGC CTTACCTCCA GAAATCAGAT CTGAGCAATC GAGAAAGTTC
AACAGCGGAG AATTTGATAT CTTGGTAGCT TCTGATGCTG TTGGAATGGG ACTCAATTTG
AAGATCAAGA GAATCATCTT CCAGACGGTA AGAAAGTTCG ACGGAAAGGA AATGACCAAC
TTGACTGTTT CAAGCGTAAA ACAAATTGCT GGTAGAGCTG GTAGATACTC CGAGACGCAT
GGAATGCAGA CAGGATATGT TTCAGCACTT ACGTCTCGAG ACTTGATGTA TATCAAACAA
GCCATGAATG CCCCCATCAG AGAGTTGGAA AAGGCAGCGA TCTGGCCAAC ATTTGATATA
TGGAAACAGT ACATGGCAAA GTTTTCTAAA GACGAATCAT TGTACGATTC GTTGTTGCAG
TTCGAAAGAG AGACGAAGGA CAAGAGAATG GAGCATTACT ATGTTGCCAC AGTGGATGAC
AAGGCGGAGC TCATGAAGCT CTTCTTACGA GAAAACCTAT ACAAAAAGGT TCCCATCGAC
GACCAGTTGA TCTTAAGTTT GTGTCCTATT AACTTAAACA TGTCATCTCC CGAGGTCACT
GAAATGACGT TCAAGTATAT CAAGAATGTT CATCAGAGAA CCACCAAGAC AATCTTTGAC
TTCGGCTTTA TTGACCATAA GCTCCTTACG ACTTCGCCCA ATATTGCTTC TGTGCACTTT
GACAAGAGTG CGGCCTTGCT TCGTCTTCTT GAAGATCACC ATAAGGTAGT GTTGATGTTC
TTGTGGTTGA GCCAAAGATT TCCAACGTTG TTTGTAGATA AGGAGAGTGC TACCGAGTTG
AAGACATTGA TAGAAAAGAG GATCCAGCAG GAGTTGTCCC ATTTAAGGCG GATCAGCAGG
TAA
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| Protein sequence | MSRLYDQFQQ RSFSGAYAGL NSATRQEAEL VLSKLKQRLF NEFGVFTKLS HEEQLAKVNG
LSLVQYMNPR FADICPLIYS IDAEKYPKGY IEFNGLETKI DLLTLIMTNL VFKEYMVYKI
ETSKNTDQDY IDLSNPAQWF PEARKMKRKI VMHVGPTNSG KTYNSLKKLA EAKTGYYAGP
LRLLAREIYE KFLSTNVRCN LITGEEIIPC MDKFGKVSGI SSGTIEMIPL HKKMDVCVID
EIQMIADPGR GSIWTNALLG VLAKEIHLCG EESAVPLIKK LAKMTGDEVE VKQYKRLGEL
KVTDKAISYN KLEKGDCLVA FSKHKILQLK CEIERRTNLS VGVVYGALPP EIRSEQSRKF
NSGEFDILVA SDAVGMGLNL KIKRIIFQTV RKFDGKEMTN LTVSSVKQIA GRAGRYSETH
GMQTGYVSAL TSRDLMYIKQ AMNAPIRELE KAAIWPTFDI WKQYMAKFSK DESLYDSLLQ
FERETKDKRM EHYYVATVDD KAELMKLFLR ENLYKKVPID DQLILSLCPI NLNMSSPEVT
EMTFKYIKNV HQRTTKTIFD FGFIDHKLLT TSPNIASVHF DKSAALLRLL EDHHKVVLMF
LWLSQRFPTL FVDKESATEL KTLIEKRIQQ ELSHLRRISR
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