Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_31696 |
Symbol | HMC3 |
ID | 4838557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | - |
Start bp | 1458079 |
End bp | 1459323 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 12 |
GC content | 38% |
IMG OID | 640389872 |
Product | hypothetical protein |
Protein accession | XP_001384579 |
Protein GI | 150865386 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.772275 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.350827 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAATT TTTCCACAAA TGCTCTGTCG ACTGGTAGAT CGGAACTGCC AGAAGAACAG ACATTCAGTC CCATCACTGC AAGTCTTCTC GCAGAAGCGA TTAGGGAACA AGCAAATCAA TTGCTTGAGA AACAATCAGA CGAATTTGAG GCTAAATTTC TACTGCTTCA AAACCAAATT CATGATATCC TAACGCTTAT TTCTGCCGAG AAAAGTGGTA ACAGAAAAGG AGTTTCGAGA AATACTGACG ATTCTTCGAC CATTACGAGT ACTAATAGTG ATATTAATCT TATTCAATCT AGTATTGAGT CTAGTTCGGT GCTCGCTGAT GATGACTTAA GTGTAAACAT CAGTGCTCCA CCTAAAATTG AACACTCTCC ATCGTTTAAA TCAAGTAAAC ATTCTGCTGA AAAAACATTC AATTTATTTG AAAGAACTAA CGATACGATT CGAAAGTCTC AGAAACGCTT TCATGAATCT TGGAGAAAAT TACCCAAGCT CAATGATAGC AGCGTTGAAC TCTGGTCCAG GGCTCTTCAG GAACTAAACA GTGACCCAGA CTATAAAGCT TTGTCTAAGG CAAACTTCAA AGTAGACTGG AACAGTTTCG AATCCAGAAC TGGACTCCAT GGTAATGAAC TTAAATACTA CTACGATTGC TGGAAGGATG ATCTCATTGC ACCTTATTGC AATAATACTT TGAGTATTCT TGCTGCTACC CGAGATCATA CTGTCACCCT TGAAGATCTA ATTGAGTACA CATCGGAGCA TGCAGATGAT GCTAAAACGA TGTCTATACT TGAGGAAGTG CAACGACGCT ACCGAATCGA TATACTGTGT AAAGACTATG TCTCAGAATT GAGAGGCAAA AACACGCATG ATTATGACCG TATAATTCAA TTTATTGACG GTATTCCTTC CGACCTATAT GGCACCATTA GTCACTACTG TAACCAAAGA CACGATGGCA ATTGTATAAT AGCTGCCGCT ACGGCCAATT TCTATTATAA AGAATTTATG ACCAAGGAGA ATTTTCATTA CCCTACCCCC AACACTTTCC AAAAGAAAAT GATCAGTACA CCTGGTTTCT CTGGTAAAGT TTTATCTGAT TCCTCTAAAT CAAGAACGAA TTCCAAACAC AGAAAAGACA GGAGTAACTA TAATAATTAT TCTCAAAATA AACTGCTGTT GGAGAATAAC CAGAAATCGC ACAGAAGACA AACGGACAAT GTTAATCACA ACTAA
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Protein sequence | MSNFSTNASS TGRSESPEEQ TFSPITASLL AEAIREQANQ LLEKQSDEFE AKFLSLQNQI HDILTLISAE KSGNRKGVSR NTDDSSTITS TNSDINLIQS SIESSSVLAD DDLSVNISAP PKIEHSPSFK SSKHSAEKTF NLFERTNDTI RKSQKRFHES WRKLPKLNDS SVELWSRALQ ELNSDPDYKA LSKANFKVDW NSFESRTGLH GNELKYYYDC WKDDLIAPYC NNTLSILAAT RDHTVTLEDL IEYTSEHADD AKTMSILEEV QRRYRIDISC KDYVSELRGK NTHDYDRIIQ FIDGIPSDLY GTISHYCNQR HDGNCIIAAA TANFYYKEFM TKENFHYPTP NTFQKKMIST PGFSGKVLSD SSKSRTNSKH RKDRSNYNNY SQNKSSLENN QKSHRRQTDN VNHN
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