| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_31676 |
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| Symbol | |
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| ID | 4838863 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | - |
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| Start bp | 1410166 |
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| End bp | 1413203 |
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| Gene Length | 3038 bp |
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| Protein Length | 449 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640390178 |
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| Product | predicted protein |
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| Protein accession | XP_001384568 |
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| Protein GI | 126136088 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2939] Carboxypeptidase C (cathepsin A) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.499026 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAAG TAGGCTATGG AAGCCCACCA GATCCTCGGT ATCCCTATCC TAGCCCTTGG
TGTATTATTG TTACCGACAA TGTATTTTCT GCGTATTTTC TCATCGTGGT ATTTTCAATC
GGATAACAGA ATGCTACGAG GGTTGGATCT AGTGGTGTTC AACCACAGCT TGTAGTCGTA
GGCAGCTAGT GGCAACTAGG TGGGTCAAGA TCCTCGTCGA CAATTACAGG TTCTAGAAGG
ACTAAAATGG GATTTCTGCT ACGGTAATTC ATGGCAACCA GAGATCTGTC TCAGGTCTTG
CATTGTCTTA CATACGAAAA CTTCCTTAAT TAGTGGAAAT TTTGCACTAT TTTCTGGAAC
ATACAGTATA TGCCTGGCAT TGTCGGCGGG GCTCTTTGTG CAGTTTGGAT CCTTAGGCGG
CTAGCGTAGT GACTTTGACG TGGTAGTCTA CGGGTCTTTG TCAAATCTCA AAATGTGATA
ATTTGGTAGC AGCCGATATC ACAGTCTTCT GGAACTGAAA AATACAGCCG AGTGGGGAAG
ATACCATTGG CCTTGTTGAA GGTATAGTCG GTGTGGGCTG TTCTGGACGC GCAGTTACGC
AGCCTTTTTC GTCAACTCCC CAATCTTAGC TCCCGCTTGC ATGGACATAC TTCCACTCCT
AAGGGATAGT TGACCTTTTT CTAAATGTAG CGCGGATGTC GATCATTCCT GAATGTAATT
TTCAACTCAC CCCTTGAACA ATTGCAATTT TAATTTTTTA AAGATGGGTT TAAAGGCTAT
TGTCGAGATA TCGGACCCAG CTATCACTTT GGCCATTGAC GAATTATAAT TAATTGCCGT
CAAATTTATT TGCTTGCAAT GGATACGTTT TCACGGTGTT CTCGCATTGG GTATCTAAAC
AGCTTCTTGT TGCTGGCCCA GGGCTACAGA TATTTACGCC TCGTTTAGAC ACCAGCTATT
GTTCTCGAGC TTCTACGATA AACCCCCTTT CCACGTCATC TAAAAGCCAA AAATCCACCG
TAATATCCTG GATCTATGGT TATCAAACCT TGGCTCACTT TCTTGACGTG CAGATAGCAG
CACTGGACCA TCGCCAGAAA CCAAAGTCAG AATAAGCCTA CTTTGTATAA CATCCTCTGA
CTTGAACGAA ACCGAGGAAA CTCCTGTTCG GAAAATGGAC ATGAAGAAGT TCGGACCATA
GTGGCACCTG TCGATTTACT TCATTGGATC CGTGAACTTT ATTTTATCTG AATAGTGATT
TCATACGCAT TCTTGTCTTG CGTGCCTATG AAACAGGGAC CCCTCGTGTT TGGAGAGCCA
ACGCAACCCA ATCGGCATTA ATTGGGACGT TTCTATCCCA TTTTTGGCTT CACATTGTAA
GTTGAGTTCT GTGTCTAAGT ACTCTCCACA TAAATAAAAT CAGCTCCATA TCGCTTCATG
AATTCAATTA CCTTTGAATA TCTTCACGTG ATCGTACGGC TCAAGTATGG CTCTCCCAGT
TTAACCAGCT AGTTCTTATC TAGTCTATCT CTTTAGTTTT CTCTGCCTCA GGTCAATTGA
GTAGTGCGAT GAAACTTCTG ATCGGCACTA TTCTACTTTC GGGCTTGTGT GGCTCTGTTG
CCACAGCGTA TTCTTTATCT TCCTTGCAAC AGTTTTTGGG CTTCAAGGAA GTTTCGGATG
CACACGATAT TGCAAATCTT GGTAATTCTG GGCCTTTGGA CAATTTATTT GATGTAGTTT
CAAACGAGAA CTATGCCAGT CACAGGTTGC GAGTTAAGCA CATAGATCCG CTTGTTCTCG
GTCTAGATAA AGTAAAGCAA GTCACGGGAT ATTTGGATAT CGAAGATGAC AAGCACTTGT
TCTATTGGTT CTTTGAATCG AGAAACGATC CCCAGAACGA CCCAGTAGTA TTATGGTTGA
ATGGAGGGCC AGGTTGCTCT AGCTCAACGG GACTCTTCTT TGAGTTGGGG CCCTCTTTTA
TCAATTCAAC CCTTCAGCCA GAATATAACC CCTATTCGTG GAACTCGAAT GCGTCTGTTA
TCTTCTTGGA TCAACCTGTA GACGTAGGAC TCTCGTACTC GGATGACAAC GAAGTTTCAA
CTACGGCTGC TGCTGCAAAA GATGTATACA TATTCTTGGA ATTGTTCTTC CAAAAGTTTC
CACAATTCCA AAGCAGAGAC TTTCATATGG CTGGAGAATC GTATGCTGGC CATTACATTC
CTAAGTTCGC GTCGGAGATC CTCAGTCATC CGGAAAGGTC GTTCAACGTG ACTTCAGTTC
TCATTGGAAA TGGGTTCACT GATGCTATTC CACAATATAA AGCTCTTATT GGAATGGGAT
GTGGACAAGG AGGTTATGAT TCAATCTTGT CAGAACAAGA TTGCAAGGAA TTGGAAGAGA
ATTACTATCC CAAATGCAAG CAATTCCTTG AACTATGCAA CAGGGAACAG GATGCATTGA
CATGTGTACC AGCTTATCAT TACTGTGAAA CAAGAATGTT TATTCCTTTC TCCAAGACGA
ACTTGAACCC ATATGACATA CGTGAAGAAT GTGAAAGGGG TGGAACTTGC TACGAGGAAC
TAGACGATGT GGACGCTTAT CTCAACCTTG ACTTTGTCAG GAGTGCCATT GGGGTTTCTC
CTGAAGTCAA GAAGTATGAA GGTTGTTCTG ATGTTGTATC AAAGAACTTT GCCTTGGAAG
GCGATAAAGC ATTGCCCCAT CAGCAGTATG TTGCCGAACT TCTTGAAAAG GAGGTAGCAG
TATTGATATT TGCTGGAGAT AAAGACTATA GATGTAATTG GTTAGGTAAC TACGAGTGGA
CAGACCAATT AGACTATGAT GGTCATGATG AATTTTCAAG TAAACCTTTG GTGCCATGGC
AAACTTCTGA CGGCAGTATT GGTGGAGAGT ACAGGAACTA CGAAAAGTTC ACTTATTTGA
GATTCTACGA TGCTGGCCAT TTGGTCCCTC ACGATCAACC CCAGAGGGCA TTGGAAATGG
TTAACAGTTG GTTACAAGGA CAGTATTCAT TGAACTAA
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| Protein sequence | MSEVGYGSPP DPRYPYPSPW FTQPFSLRVK HIDPLVLGLD KVKQVTGYLD IEDDKHLFYW
FFESRNDPQN DPVVLWLNGG PGCSSSTGLF FELGPSFINS TLQPEYNPYS WNSNASVIFL
DQPVDVGLSY SDDNEVSTTA AAAKDVYIFL ELFFQKFPQF QSRDFHMAGE SYAGHYIPKF
ASEILSHPER SFNVTSVLIG NGFTDAIPQY KALIGMGCGQ GGYDSILSEQ DCKELEENYY
PKCKQFLELC NREQDALTCV PAYHYCETRM FIPFSKTNLN PYDIREECER GGTCYEELDD
VDAYLNLDFV RSAIGVSPEV KKYEGCSDVV SKNFALEGDK ALPHQQYVAE LLEKEVAVLI
FAGDKDYRCN WLGNYEWTDQ LDYDGHDEFS SKPLVPWQTS DGSIGGEYRN YEKFTYLRFY
DAGHLVPHDQ PQRALEMVNS WLQGQYSLN
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