Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_31529 |
Symbol | |
ID | 4838373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | + |
Start bp | 1018781 |
End bp | 1019728 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640389688 |
Product | predicted protein |
Protein accession | XP_001384150 |
Protein GI | 150865081 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.297491 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGATACT CAACGTTAAC TTGCTTGGCA CTTATCTCAA CGATTCTCAA TGGATTTCCC ATTTCAGGAG ATATGGGTGG TAAAAATGCA CGAGGTAGCT ACTCAGAAGG GAAGGATTTC TTTGACCCTA ATCCTGGAGC AAACGGTGAG CCACCAGTGA ATACCATTAA GGTACTGACA TTGGACGGAG TATTGTCGAA GTATGGTTAT CTCTTGGAGA GTGAAAATGA AGAACAATTT CTATTCCACA TAATTGAAGA CAACTCGTTC CTTGTAAGAG CTCATGCTGC TGTAGTTGGG AAACCCACCA CCGGTCCAAA CTCACCTGTC CAAAATTTGG ACGACATTAC CAAAAGAGGA ATCTTTCGGA AGAAGAAAAA GAACAATAAG CAAGCGAATC AAGAAAAGCA AGTAGCTGGC AAGGCTAATG AAAAAAGATT TGACTGGGTA CATTTCACAT ATGAAGATGA AGAAGTCACC CGTTATCCCC ATATTCCAAT TAGCGCTTGT CAATCTCAAG AATTTGGACA GGAAGGATCA ATATCCTTTT CTTACGCTTT CTCTTCAACC TTGCATTCCA AGCACAACTT CGACGTAACA TTTCTGATTA CTTATATGAT ATTTTCTGTC GCACTAGGTA TGAAGATGAG TGTCGAATTA ACCTCAACAA GAGAAGTGAG TGGAACCACA ACCTGTAATC TCAAGGCTGG GCAGGTTGGC CAAATCTGGG CAAGCCCAGT GTATGCTTCA GCAAAACCAA AAACGAGACT ACTCCAGTGG AGGTCAGACA CGCAGGAATT CTTAACTTTG TCTGAATTCA AGGTGTATGA GAGACTTTTT GCTCTTATGG AACATTCAAT TCTTGAAATT GAATGTGTTA CGAGCGACAT TGCAAGACTT GAATGTACGA AGAGACCTGG TGACCCATAC ATGTCCTCTT TACTTTAA
|
Protein sequence | MRYSTLTCLA LISTILNGFP ISGDMGGKNA RGSYSEGKDF FDPNPGANGE PPVNTIKVST LDGVLSKYGY LLESENEEQF LFHIIEDNSF LVRAHAAVVG KPTTGPNSPV QNLDDITKRG IFRKKKKNNK QANQEKQVAG KANEKRFDWV HFTYEDEEVT RYPHIPISAC QSQEFGQEGS ISFSYAFSST LHSKHNFDVT FSITYMIFSV ALGMKMSVEL TSTREVSGTT TCNLKAGQVG QIWASPVYAS AKPKTRLLQW RSDTQEFLTL SEFKVYERLF ALMEHSILEI ECVTSDIARL ECTKRPGDPY MSSLL
|
| |