Gene PICST_31529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_31529 
Symbol 
ID4838373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp1018781 
End bp1019728 
Gene Length948 bp 
Protein Length315 aa 
Translation table12 
GC content41% 
IMG OID640389688 
Productpredicted protein 
Protein accessionXP_001384150 
Protein GI150865081 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.297491 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATACT CAACGTTAAC TTGCTTGGCA CTTATCTCAA CGATTCTCAA TGGATTTCCC 
ATTTCAGGAG ATATGGGTGG TAAAAATGCA CGAGGTAGCT ACTCAGAAGG GAAGGATTTC
TTTGACCCTA ATCCTGGAGC AAACGGTGAG CCACCAGTGA ATACCATTAA GGTACTGACA
TTGGACGGAG TATTGTCGAA GTATGGTTAT CTCTTGGAGA GTGAAAATGA AGAACAATTT
CTATTCCACA TAATTGAAGA CAACTCGTTC CTTGTAAGAG CTCATGCTGC TGTAGTTGGG
AAACCCACCA CCGGTCCAAA CTCACCTGTC CAAAATTTGG ACGACATTAC CAAAAGAGGA
ATCTTTCGGA AGAAGAAAAA GAACAATAAG CAAGCGAATC AAGAAAAGCA AGTAGCTGGC
AAGGCTAATG AAAAAAGATT TGACTGGGTA CATTTCACAT ATGAAGATGA AGAAGTCACC
CGTTATCCCC ATATTCCAAT TAGCGCTTGT CAATCTCAAG AATTTGGACA GGAAGGATCA
ATATCCTTTT CTTACGCTTT CTCTTCAACC TTGCATTCCA AGCACAACTT CGACGTAACA
TTTCTGATTA CTTATATGAT ATTTTCTGTC GCACTAGGTA TGAAGATGAG TGTCGAATTA
ACCTCAACAA GAGAAGTGAG TGGAACCACA ACCTGTAATC TCAAGGCTGG GCAGGTTGGC
CAAATCTGGG CAAGCCCAGT GTATGCTTCA GCAAAACCAA AAACGAGACT ACTCCAGTGG
AGGTCAGACA CGCAGGAATT CTTAACTTTG TCTGAATTCA AGGTGTATGA GAGACTTTTT
GCTCTTATGG AACATTCAAT TCTTGAAATT GAATGTGTTA CGAGCGACAT TGCAAGACTT
GAATGTACGA AGAGACCTGG TGACCCATAC ATGTCCTCTT TACTTTAA
 
Protein sequence
MRYSTLTCLA LISTILNGFP ISGDMGGKNA RGSYSEGKDF FDPNPGANGE PPVNTIKVST 
LDGVLSKYGY LLESENEEQF LFHIIEDNSF LVRAHAAVVG KPTTGPNSPV QNLDDITKRG
IFRKKKKNNK QANQEKQVAG KANEKRFDWV HFTYEDEEVT RYPHIPISAC QSQEFGQEGS
ISFSYAFSST LHSKHNFDVT FSITYMIFSV ALGMKMSVEL TSTREVSGTT TCNLKAGQVG
QIWASPVYAS AKPKTRLLQW RSDTQEFLTL SEFKVYERLF ALMEHSILEI ECVTSDIARL
ECTKRPGDPY MSSLL