Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_31495 |
Symbol | |
ID | 4838663 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | - |
Start bp | 944347 |
End bp | 944952 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 12 |
GC content | 48% |
IMG OID | 640389978 |
Product | predicted protein |
Protein accession | XP_001384485 |
Protein GI | 126135922 |
COG category | [R] General function prediction only |
COG ID | [COG0655] Multimeric flavodoxin WrbA |
TIGRFAM ID | [TIGR01755] NAD(P)H:quinone oxidoreductase, type IV |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0157173 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0627326 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAAGA CTCCAAAGGT TGCAATCATC TACTATTCAT TGTACCACCA CATCTCTACT CTTGCGGACT CCATTAAGGT TGGAGTTGAA TCTGCCGGAG CCCAGGCAGA TTTATTCCAG GTACCGGAGA CGTTAGCACC CGAGGTTCTT TTGAAGCTTA ACGCTCCTCC CGCGAGAGAA GTGCCAATAG CTACAATCGA AACTTTGAAA GAATACGACG CTTATTTGTT TGGTATCCCC ACCAGATTCG GAACGTTCCC AGTCCAGTGG AAATCGTTCT GGGATGCCAC TGGTGGAATT TGGGCTGCTG GAGCTCTCAG AGGTAAATTT GCTGGAGTGT TTGTGGCTAC AGCAACTCCT GGTGGTGGAC AAGAAGAAAC TGTGATCAAT TCATTGTCGA CATTGACTCA CCATGGTATT GTCTTTGTTC CATTTGGGTA CGGTCATCCA GGGCTCAACA GCTTTGCTGA GATTCGTGGT GGTTCTGCTT GGGGAGCTGG AACGTTTGCC GACGCGGACG GTTCTCGTAG CGTGAGTGAA TTAGAAAAGG ACATAGCCAA GACACAGGGT CACGACTTTG TCACTACTAT CACTAAATTC AGTTAA
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Protein sequence | MAKTPKVAII YYSLYHHIST LADSIKVGVE SAGAQADLFQ VPETLAPEVL LKLNAPPARE VPIATIETLK EYDAYLFGIP TRFGTFPVQW KSFWDATGGI WAAGALRGKF AGVFVATATP GGGQEETVIN SLSTLTHHGI VFVPFGYGHP GLNSFAEIRG GSAWGAGTFA DADGSRSVSE LEKDIAKTQG HDFVTTITKF S
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