Gene PICST_31495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_31495 
Symbol 
ID4838663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp944347 
End bp944952 
Gene Length606 bp 
Protein Length201 aa 
Translation table12 
GC content48% 
IMG OID640389978 
Productpredicted protein 
Protein accessionXP_001384485 
Protein GI126135922 
COG category[R] General function prediction only 
COG ID[COG0655] Multimeric flavodoxin WrbA 
TIGRFAM ID[TIGR01755] NAD(P)H:quinone oxidoreductase, type IV 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0157173 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0627326 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAGA CTCCAAAGGT TGCAATCATC TACTATTCAT TGTACCACCA CATCTCTACT 
CTTGCGGACT CCATTAAGGT TGGAGTTGAA TCTGCCGGAG CCCAGGCAGA TTTATTCCAG
GTACCGGAGA CGTTAGCACC CGAGGTTCTT TTGAAGCTTA ACGCTCCTCC CGCGAGAGAA
GTGCCAATAG CTACAATCGA AACTTTGAAA GAATACGACG CTTATTTGTT TGGTATCCCC
ACCAGATTCG GAACGTTCCC AGTCCAGTGG AAATCGTTCT GGGATGCCAC TGGTGGAATT
TGGGCTGCTG GAGCTCTCAG AGGTAAATTT GCTGGAGTGT TTGTGGCTAC AGCAACTCCT
GGTGGTGGAC AAGAAGAAAC TGTGATCAAT TCATTGTCGA CATTGACTCA CCATGGTATT
GTCTTTGTTC CATTTGGGTA CGGTCATCCA GGGCTCAACA GCTTTGCTGA GATTCGTGGT
GGTTCTGCTT GGGGAGCTGG AACGTTTGCC GACGCGGACG GTTCTCGTAG CGTGAGTGAA
TTAGAAAAGG ACATAGCCAA GACACAGGGT CACGACTTTG TCACTACTAT CACTAAATTC
AGTTAA
 
Protein sequence
MAKTPKVAII YYSLYHHIST LADSIKVGVE SAGAQADLFQ VPETLAPEVL LKLNAPPARE 
VPIATIETLK EYDAYLFGIP TRFGTFPVQW KSFWDATGGI WAAGALRGKF AGVFVATATP
GGGQEETVIN SLSTLTHHGI VFVPFGYGHP GLNSFAEIRG GSAWGAGTFA DADGSRSVSE
LEKDIAKTQG HDFVTTITKF S