Gene PICST_31458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_31458 
Symbol 
ID4838554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp858558 
End bp859481 
Gene Length924 bp 
Protein Length308 aa 
Translation table12 
GC content40% 
IMG OID640389869 
Productpredicted protein 
Protein accessionXP_001384118 
Protein GI150865062 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.278431 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.5587 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAATGA TCCCTGCCCT GTCATCTCAG TCTGAGAAGA GGACTCTGCC GCATTACACA 
CAAGACGATC AAAGCACCAT CTTACCTGAA AAGATCTATC CTCCAGCCTA CTTTGAGCCG
ACAAACGAAT ATCTCAACAA GGGATGGAGA TTTATGTTTT GTAACAACAA CTTCAATTCT
GATCTAAGGG TATTTGTTTC AGCTGATTCT GTAGGGAAGT ACAAATCGTT CAAGGATGCT
AGCGGCGCAC AGGCTGCTAA GTACGCTCGG GAATTGCAAA TGCAAGGGGT TGGCATACCG
TTGCTAAAAG CTGACATTCA TAGACTCAGT CTTAACAAGT TTTTAACTAT TAAGCGGTAC
TATGTGGATA AGCAAAAGAT CAAGTTGCGA GGATTCGATA GCAAGCAAGA CTTGCATGAC
TTCTGTGTCG TATGGAAATA TCGTCACGGT TCATATTCTA CCTATGAATT AAAGTTCACT
CCTGATCCCT ACGACAGAAA ACAGGACTTC ACCATCGTGG TGTTTCAGCA TGGTGTTTTA
CCAATTGCAG ATTATGTGTA TAATGGAAGT CGCTACAGGT GGATACATGA AAGAAGGTCG
TATGGGTACA TTTATAACTA CTCCAATTTC CTATTGTGTC CTACTCAGGA TTCTATGACA
GACAATTGGG ACAAAAAAAC AAATAGGTTG GAAAAGTCAA TTGACCCTAA TAATCCCTTG
GTGGGTGGTT ATTTGTCGAA ATTATTATCG ATTAGGTCGC ATTTTACCAA GGAAGAATAC
TATTCTCCAA TGAAACTAGG CTCGTTGGAC GAAAAAAGGG ACTTTTCAAT TCTTGGTCGC
TTCAAACAAA AAGCTCTGTT CACAATGGGA GATATCTACA ATACCTCTAA CGATCCTACT
GTTAATTATG AAAGTATATA TTCG
 
Protein sequence
MSMIPASSSQ SEKRTSPHYT QDDQSTILPE KIYPPAYFEP TNEYLNKGWR FMFCNNNFNS 
DLRVFVSADS VGKYKSFKDA SGAQAAKYAR ELQMQGVGIP LLKADIHRLS LNKFLTIKRY
YVDKQKIKLR GFDSKQDLHD FCVVWKYRHG SYSTYELKFT PDPYDRKQDF TIVVFQHGVL
PIADYVYNGS RYRWIHERRS YGYIYNYSNF LLCPTQDSMT DNWDKKTNRL EKSIDPNNPL
VGGYLSKLLS IRSHFTKEEY YSPMKLGSLD EKRDFSILGR FKQKASFTMG DIYNTSNDPT
VNYESIYS