| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_31452 |
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| Symbol | |
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| ID | 4838976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | - |
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| Start bp | 836762 |
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| End bp | 838561 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640390291 |
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| Product | predicted protein |
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| Protein accession | XP_001384462 |
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| Protein GI | 150865306 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0724] RNA-binding proteins (RRM domain) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.277299 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGATT CATCGACTAA TGAAGAGTCG GTCTCGTCCA GCGGCGAATC CGTCTCCACT
GATCTTATCA GCAAAGACGA AGACCTCAAG AATGCTGAAC AGAACCTGGC TACTGATTAC
AACGAGACTG TGGGCTCTTC CAAAAAGATC CACAACACAG CTATCGGCGA ACTATTGCAG
CCGTTGAAAG AGTCTGCCGA AGACGACAAC GATAAACAAG ACGCATCGGA GCCTCTTCCC
AGAGGCAGAC CATCTTCTTG TGTCTTTGTT GCCAGTTTAT GTTCTTCGCG ATCTGATGAT
GAATTGTGTG TCTCCGTCAC CAATCACTTT CTGAAGTGGG GCAAGTTGTC CACAGTCAAA
GTTCTACGTG ATACGTCTAA TCGTCCGTAT GCGTTTGTTC AGTATACAAA CGATCGTGAT
TCCAAATTGG CTATCAGGAT GGGCCACGAT TCTGAATTGG ATGGAAGAAA CATCCGGTGT
GAAGCAGCTA AAGTAAACAG AACTTTATTC ATAAGTTCAA ACGAATTAGT TCATGAGAAC
AAAATGAGTG AATTTCTCAG TGGGTTTGGT GAGATTGAGC AGATCCTCTC AAGCAACAGC
TCAGGACATC TTGTAAGATA CAAAGTGAGC AAGTCGTCTA AGTATTGGTA CTGTAAATTT
GTATATCGTG AAGACGCCAT TAGAGCATTT GCCAATATCA CGGAGTCTTG TGCCTATAAA
GTAGATTGGA CCCAGAATAT TGAGGAGGAT GTTCATTATG GACACAGAGA TGAGGTCTCC
CAGGAGACGC AAGTAACCTT TGATAAATTC TCCATATTTG TAGGCCAATT GCTGGCTGAA
GTCAGCGAAA AAGATCTTGA TAGTCGATTT TCACGTCACG GCACTATTGC TGATATCAAT
CTTATCCGCA AAGGATCCAA TCTGTTTGCC TTTGTCAGAT TTGAAAAGGA ATCCAGTGCA
GCAGGAGCCG TAGAAAGAGA AAACCATGCC ATGTTTAAAG GAAAGACTTT GCATGTACAA
TACAAGGAGA CTCATTCCTT AACAAAGTCT GTTAAAAGTA AGCCGGTTGG ATTGGCATTT
GCACCACCTC CTATTCATTT ATCACGTAAA GTTGAGAACT GTTACAGAAA AACTTCAGGT
AATAACTTTC CTCCGTTGAA ACCGAGATTT AATAACTATT CTTCGAATAA CGCCAATAGA
GGAAGCTATC AACTGTATAG AGGGAACTAC AAGCTGCATT ATTCTAATGT ACCTAATCGT
GTGAGAAGAT TTACATCTAT GAATACCACA CCTAGTGGTT CAGCCCATGG AAAAGGAGAA
ACTACCAGTG AGAGAAGTGC CTGGAGCCCT GAAGCCAAAG GAAGCTTGGA AGCAAATGGA
TCACCTCCTA CTACTCCAGT TCCAAAGCAG GCTGATATCC ATGCATGGAG AAATGTATAT
GGACATCAAG GAGGATCGAA CCCAGATAGA CCGGACCCAA GTAATCCCTA CCATAAATTG
GCAAGACCAG ATATGAGTGG GGGAGCTCCT CCCCCTAAGA ATGGAATTCC TTACTTTTAC
TATATTCCCA ATCCTGAAGT TTCCAACATG CATGGAAGCG GATTCATGGG AGCTCCAGTA
AGTTCAGGCA ATCCAGTGGG ACTAAGTCCC AACCCCAAGG GCTTCTATCA GCCATACTAT
GTACCATATG ATACGCATGA GTACGGGCCA GCGGCAGCAG CAGCAGCAGC AGCCGCGTAT
TCGATGCAAT ATCCAATGTA TTATCAGGCG AAAGAAAATA ACGCAAATGA TGAGAACTAA
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| Protein sequence | MSDSSTNEES VSSSGESVST DLISKDEDLK NAEQNSATDY NETVGSSKKI HNTAIGELLQ
PLKESAEDDN DKQDASEPLP RGRPSSCVFV ASLCSSRSDD ELCVSVTNHF SKWGKLSTVK
VLRDTSNRPY AFVQYTNDRD SKLAIRMGHD SELDGRNIRC EAAKVNRTLF ISSNELVHEN
KMSEFLSGFG EIEQILSSNS SGHLVRYKVS KSSKYWYCKF VYREDAIRAF ANITESCAYK
VDWTQNIEED VHYGHRDEVS QETQVTFDKF SIFVGQLSAE VSEKDLDSRF SRHGTIADIN
LIRKGSNSFA FVRFEKESSA AGAVERENHA MFKGKTLHVQ YKETHSLTKS VKSKPVGLAF
APPPIHLSRK VENCYRKTSG NNFPPLKPRF NNYSSNNANR GSYQSYRGNY KSHYSNVPNR
VRRFTSMNTT PSGSAHGKGE TTSERSAWSP EAKGSLEANG SPPTTPVPKQ ADIHAWRNVY
GHQGGSNPDR PDPSNPYHKL ARPDMSGGAP PPKNGIPYFY YIPNPEVSNM HGSGFMGAPV
SSGNPVGLSP NPKGFYQPYY VPYDTHEYGP AAAAAAAAAY SMQYPMYYQA KENNANDEN
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