Gene PICST_31437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_31437 
Symbol 
ID4838673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp804284 
End bp805369 
Gene Length1086 bp 
Protein Length361 aa 
Translation table12 
GC content40% 
IMG OID640389988 
Productpredicted protein 
Protein accessionXP_001384453 
Protein GI150865299 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0803937 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.280664 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACTAT CAGGAGTTTC ATTGAGAATT TCAGCATTTC CAACGAAGAG TGTATCTTCA 
ATTTCATACA GTAGCTTCCG GAATTTTTCA GTTCAATCTC GTACCTACAA TACAGTTGGC
ACAGACCAAG TCGTATTGGC AGAAAAGCCT CTGTTTACAG GAAATGGGCC GTTTGTTGAG
TTGCCCAAGT TCAACGCCAT AGGTAATCCT AGTAAGCTTC TCAACATCTC GCTTCCACAG
TCTTCTAGAT TGTGTATCAG ACATGGGTTC ATGGTGGCCA TTGATGGAGA CCCTAACCAG
ATTACCAGTA CCGAAAAATG GTTGACAGAC ACAGCAGACT ATCAGGAGTT GTTATCCAAC
GAACCAGTAT CTCTTGTAAT CAACGGAAAC AACAAAAGCT ATACCGTTTT AGAAGTAGAT
AAGTCAAGTG ACGAATGGTT GATCATGGAC TATGACAACA TCATCGCTTG GACTGGGTTC
AACTTCAAAC TCTCACCTGT GGATTTGTAC AAGCAATTGT CCAGTTTCAA GACTGCTGGA
AAAGGTGTTA TTGTAATCAA TGGAGACAAC CAATTGTTCA ATGTCAATGT CAATGCTGGC
GAAGAAGTAT TTGTAGATCC AAATACGTTG ATTGCTACTA CAAGAAAACC AAGGACAAAG
ATTATGACTA AAGGAAAATC TTTAACATTG TTCAAAAGAT ACGGAACATC AAAAGACGAA
AACAAAAACA CAACACCAGT CAAGTTCAAT TTACCTAGAG TGGGTCTCGT CGGTGGAGTC
GTTGTTAGCA TCGAAAAGAA ATTAAAGTCA CTACAAAATA GCATTACAAA CGTATTTGAT
ATTTCCAGCA TACGGTCGAA CTGGAGCTCA GTCAAGACAT CATTGAAGCC TATAAGCAGA
TACGTTTACA TAGCATATGA ATACGTCAAA TTGTTGCTTG TTGGTAACAT CATAAAGAGA
GATCCTATAT TCTTCCGCAT CACGGGACCA GCCAAGATTC TAATCAACAC CAATACGGAT
AAGTACGGTC GTATATTCAC TAAGCGAGAA ATCGAGGCAA TTCACCGGAC TGGCAACATG
AATTGA
 
Protein sequence
MRLSGVSLRI SAFPTKSVSS ISYSSFRNFS VQSRTYNTVG TDQVVLAEKP SFTGNGPFVE 
LPKFNAIGNP SKLLNISLPQ SSRLCIRHGF MVAIDGDPNQ ITSTEKWLTD TADYQELLSN
EPVSLVINGN NKSYTVLEVD KSSDEWLIMD YDNIIAWTGF NFKLSPVDLY KQLSSFKTAG
KGVIVINGDN QLFNVNVNAG EEVFVDPNTL IATTRKPRTK IMTKGKSLTL FKRYGTSKDE
NKNTTPVKFN LPRVGLVGGV VVSIEKKLKS LQNSITNVFD ISSIRSNWSS VKTSLKPISR
YVYIAYEYVK LLLVGNIIKR DPIFFRITGP AKILINTNTD KYGRIFTKRE IEAIHRTGNM
N