Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_31437 |
Symbol | |
ID | 4838673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | - |
Start bp | 804284 |
End bp | 805369 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 12 |
GC content | 40% |
IMG OID | 640389988 |
Product | predicted protein |
Protein accession | XP_001384453 |
Protein GI | 150865299 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0803937 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.280664 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACTAT CAGGAGTTTC ATTGAGAATT TCAGCATTTC CAACGAAGAG TGTATCTTCA ATTTCATACA GTAGCTTCCG GAATTTTTCA GTTCAATCTC GTACCTACAA TACAGTTGGC ACAGACCAAG TCGTATTGGC AGAAAAGCCT CTGTTTACAG GAAATGGGCC GTTTGTTGAG TTGCCCAAGT TCAACGCCAT AGGTAATCCT AGTAAGCTTC TCAACATCTC GCTTCCACAG TCTTCTAGAT TGTGTATCAG ACATGGGTTC ATGGTGGCCA TTGATGGAGA CCCTAACCAG ATTACCAGTA CCGAAAAATG GTTGACAGAC ACAGCAGACT ATCAGGAGTT GTTATCCAAC GAACCAGTAT CTCTTGTAAT CAACGGAAAC AACAAAAGCT ATACCGTTTT AGAAGTAGAT AAGTCAAGTG ACGAATGGTT GATCATGGAC TATGACAACA TCATCGCTTG GACTGGGTTC AACTTCAAAC TCTCACCTGT GGATTTGTAC AAGCAATTGT CCAGTTTCAA GACTGCTGGA AAAGGTGTTA TTGTAATCAA TGGAGACAAC CAATTGTTCA ATGTCAATGT CAATGCTGGC GAAGAAGTAT TTGTAGATCC AAATACGTTG ATTGCTACTA CAAGAAAACC AAGGACAAAG ATTATGACTA AAGGAAAATC TTTAACATTG TTCAAAAGAT ACGGAACATC AAAAGACGAA AACAAAAACA CAACACCAGT CAAGTTCAAT TTACCTAGAG TGGGTCTCGT CGGTGGAGTC GTTGTTAGCA TCGAAAAGAA ATTAAAGTCA CTACAAAATA GCATTACAAA CGTATTTGAT ATTTCCAGCA TACGGTCGAA CTGGAGCTCA GTCAAGACAT CATTGAAGCC TATAAGCAGA TACGTTTACA TAGCATATGA ATACGTCAAA TTGTTGCTTG TTGGTAACAT CATAAAGAGA GATCCTATAT TCTTCCGCAT CACGGGACCA GCCAAGATTC TAATCAACAC CAATACGGAT AAGTACGGTC GTATATTCAC TAAGCGAGAA ATCGAGGCAA TTCACCGGAC TGGCAACATG AATTGA
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Protein sequence | MRLSGVSLRI SAFPTKSVSS ISYSSFRNFS VQSRTYNTVG TDQVVLAEKP SFTGNGPFVE LPKFNAIGNP SKLLNISLPQ SSRLCIRHGF MVAIDGDPNQ ITSTEKWLTD TADYQELLSN EPVSLVINGN NKSYTVLEVD KSSDEWLIMD YDNIIAWTGF NFKLSPVDLY KQLSSFKTAG KGVIVINGDN QLFNVNVNAG EEVFVDPNTL IATTRKPRTK IMTKGKSLTL FKRYGTSKDE NKNTTPVKFN LPRVGLVGGV VVSIEKKLKS LQNSITNVFD ISSIRSNWSS VKTSLKPISR YVYIAYEYVK LLLVGNIIKR DPIFFRITGP AKILINTNTD KYGRIFTKRE IEAIHRTGNM N
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