Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_31436 |
Symbol | |
ID | 4838548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | - |
Start bp | 801898 |
End bp | 803037 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640389863 |
Product | predicted protein |
Protein accession | XP_001384452 |
Protein GI | 150865298 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.120567 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAATCT CCAAGATAAC CAGCCCAGAC GATTGGTCGT ACTTCGCGAA GGGCGCAGCC AACATCCTCT TCAAATACAA CGGGCCCAAC GACTACTTGA GACACAAACT ACTTAGAGTA AGACTTCTCA AACAGGAAGA CCAGTACATT TCCACCTGCG AGCTCTACGA CTTCATCGAG CTCAAATGCA AGCACCTATT TCCACAGCAG ATCATTGACA TTCAGCTTAT AGTGCTAACC ACAGACTTTG TCAACCAATT GGACTCCAAA GGAAACCAGT TGATGCTAAA AGAAAGATAT GGCTTGCTTA TTCCGAACAT ACTTGACGGA GACTATGAGA AACAGGTCCT ACTGAAAAAT TGCACTTTGT ACTACGATTC AAATTCAAGT ACAACAAATA TCAGCACGAA TTCAGATACA AACAAGATCG ACTCTGTGAT CTTCGAAATA AAACCCAAAT GGCTCTATGA CAACGTTTCG TCCAACTACT GCCGAACATG CCTGTATAAC CAGCTTCGGC AATACCCGAG ACACTACTGT CCATTAGATT TCTTGTACAA ACGAACTATC GACACTGGCT TGGACGATTT GTTCAAACCA ATTGCTCCCA ATATTCTCGA GAATATCGAG AATTCCAACA AAATCCCTTT AAAGAAGTTG TTCCGCAACT TTCTCAATAA TCCGGAAAAT GTGTTTCAAA AATTGAAACA GTACCAAAGA ATTAATTCCA AAAACGACCT CATCAAGAAC CTCTCTTCGC CGCTGGATGT GCTGCTGAAC CTCTCTTTGG TGATGACTTT ACGAGATGTT GGGCTCTTTA TTAAGTTTGA AAAATACAAC CCCAACAATA ACGTTCACAA TTCACAGAAC AACGTCAACA ACTTGATTGT ACTAGAAGAC GGCAAGTTCG TCGTTTCATG TAATATCTAC GACTTGGACT TGAAGTCGAA GTTGAAGTAC AAACACTGGT TGGACGTTGA ACTGAAGCTC CAGGGCATTT ATAACTCCTC TAATGATGAT TGGAAGTACT GCGTAAGTTA TAATGAAGCC ACAGACGCAG ACTTCAGCAG AGACTTGGCT AACGAAACTG TCGATCCTAG TTCAAACAAT GAAGAAATGG AAGTAGACAT AGGAATATGA
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Protein sequence | MEISKITSPD DWSYFAKGAA NILFKYNGPN DYLRHKLLRV RLLKQEDQYI STCELYDFIE LKCKHLFPQQ IIDIQLIVLT TDFVNQLDSK GNQLMLKERY GLLIPNILDG DYEKQVLSKN CTLYYDSNSS TTNISTNSDT NKIDSVIFEI KPKWLYDNVS SNYCRTCSYN QLRQYPRHYC PLDFLYKRTI DTGLDDLFKP IAPNILENIE NSNKIPLKKL FRNFLNNPEN VFQKLKQYQR INSKNDLIKN LSSPSDVSSN LSLVMTLRDV GLFIKFEKYN PNNNVHNSQN NVNNLIVLED GKFVVSCNIY DLDLKSKLKY KHWLDVESKL QGIYNSSNDD WKYCVSYNEA TDADFSRDLA NETVDPSSNN EEMEVDIGI
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