Gene PICST_31426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_31426 
SymbolRBT7 
ID4838456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp775040 
End bp776005 
Gene Length966 bp 
Protein Length321 aa 
Translation table12 
GC content45% 
IMG OID640389771 
ProductRibonuclease T2 precursor (RNase T2) 
Protein accessionXP_001384105 
Protein GI150865052 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.474806 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGTTCA AGACTTTAGC TCCTTTTATC GCTATTTTGG GTGCTGCTCA AGCTGCCCCA 
ACCCCATTGC TGTTGTCATG TTCCATTGGT TCTGAATCCT TGGTTGCTGC TACTTCTTCT
AGTGAATACT CTGTTGTCGA CTGTTCTACT TTCCTCCAGG GCCAGTTTGA TGTTTTCTCC
TGTCATAACA CAACTGAAAT CCCAGCTGGT GAATCTTGTT GTTTCGAAAA CTGGGGTGTG
TTGATGCAAA CTCAATTCTG GGACTACAAC GCTACTTACT TGGACCTTCT CAACTCTACT
AGTCCAGAAG ACCTTGCTAC TCTCGAGCAA CAAGTATTGT CTTCCTACGG CGATGACGAT
GCAAAGTCCA CCTTCACTAT CCATGGTTTG TGGAACGATT TGTGTGACGG TTCTTTCAAC
CAGTACTGTA ACCCATCTTT GGAAATCAGT CAGGCCAAGG ACAACATCAC CCACGTCATG
GTTGACGTTT TCGGTGAAGC CGACTTGTAC AAGAAGATGT CTACTTACTG GTTGAACAAT
GTCAAGTCCA ACGTCGAAAA CGCTGGTAAC ATCGACTTGT GGGAACATGA GTACAACAAG
CACGGTACCT GTATGAACAC CTTGTTGCCA AAGTGTTTCA CCGGTGCTTA CACCAGATTC
GAAAACACCA TTTCATTCTA TAAGAAGACC GTCGAACTCT GGTCCAACTT GCCCACCTAC
CAATTCTTGC AACAGTTTGG TATCACCCCA TCCTTGACTA AGCAATACAA GTTGGCTGAT
GTCCAGGCTG CATTGGCTCA AGCTCACGAT GGTAAGGAAG TCTACATTGG ATGCTTGAAA
GGTGCCATTG ATGAAATTTG GTACTACCAT AACTTGAAGG GTAACGTTTT GACTGGTGAA
TACCAGCCAA TTGACTCATT GACTCCATCC ACCTGTGGTG ATTACGTCTA CTACCTTCCA
AAGTAA
 
Protein sequence
MLFKTLAPFI AILGAAQAAP TPLSLSCSIG SESLVAATSS SEYSVVDCST FLQGQFDVFS 
CHNTTEIPAG ESCCFENWGV LMQTQFWDYN ATYLDLLNST SPEDLATLEQ QVLSSYGDDD
AKSTFTIHGL WNDLCDGSFN QYCNPSLEIS QAKDNITHVM VDVFGEADLY KKMSTYWLNN
VKSNVENAGN IDLWEHEYNK HGTCMNTLLP KCFTGAYTRF ENTISFYKKT VELWSNLPTY
QFLQQFGITP SLTKQYKLAD VQAALAQAHD GKEVYIGCLK GAIDEIWYYH NLKGNVLTGE
YQPIDSLTPS TCGDYVYYLP K