| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_31408 |
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| Symbol | |
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| ID | 4838890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | - |
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| Start bp | 726782 |
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| End bp | 727147 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640390205 |
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| Product | predicted protein |
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| Protein accession | XP_001384435 |
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| Protein GI | 126135822 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4766] Ethanolamine utilization protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00624503 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTATGC TCTACAAACC AGCTGCTGAA GGAAAGGAAG TCAGACCTCC TCAAATTCCT
TCTCCAGGTA ACAACTCCTT CTTGGGTGAC ACCTTCGCTT CTGACGCTCC TCCAGAACAA
CAAATCGTCT GTGGATTCTA CAGACAAGAA AAGGGTGAGC CTCTTGTCTA CACCTACCAC
TACGATGAAA TGAAGATCAT ATTGGAAGTT GAAGGTGAAT ACTGGATTTC TGATGAAACT
GGATACAAGG TTTCTGTTTC TCCAGGTGAT GTTTTCTACT TCAAGAAGGG TACTACTATT
ACTTTTGAAA CCACCGGCTA CGGTTATGCT TTCTTTTCTG GTTTGAGACC AGAAGGAACT
GCTTAG
|
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| Protein sequence | MPMLYKPAAE GKEVRPPQIP SPGNNSFLGD TFASDAPPEQ QIVCGFYRQE KGEPLVYTYH
YDEMKIILEV EGEYWISDET GYKVSVSPGD VFYFKKGTTI TFETTGYGYA FFSGLRPEGT
A
|
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