Gene PICST_31403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_31403 
Symbol 
ID4838450 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp716912 
End bp717979 
Gene Length1068 bp 
Protein Length340 aa 
Translation table12 
GC content42% 
IMG OID640389765 
Productpredicted protein 
Protein accessionXP_001384432 
Protein GI150865283 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.694508 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCAC ATATCGACAT CTTTCTCAAA CGGCTCGACC TGCTCCTGCA TGATATCCAC 
GACAACCTAT CCCAATTGGT CCAGATCAAC CAGAACGAGT CAATTGATGA TGCGAAATAC
GAGCTGTCCA AAGTGATACG AGACATCAAC AAACAACTTC TCAGCTACAA AGAATACCTC
CAGATCTTGC ATAACCGGCT CGGCCACTCC AAGTCCGACA CGGCAGTATA CGACCAGTAC
CATTCCAAGT ACGTGTTTCT TAAAAGCAAG ACACGTGACT TCCACTTATA TAGCCACAAG
CTCAATAACG AAATCATCCA TAAACAACGA ATTGAACGTT ATTCGCTCGA CGAAAAAGAT
ACCTTTCCAG ACCTGAACTC TCAGGAATCT GCGCGTGAGC AGTTGTTTGC CCATCGATCA
AAAAAAATCC AGGAAGCCAA AGAGACGTCA GTGAATGAAC AGATTCTCAA GCTGAACAAG
CTGATTACAA CGTCGCTTCA AACTTCACGA CAATTGCTTT CAACCTCAGT ATTACAGTCG
GAGTTAAACA TCGACCTGCT TGACCAGCAG ACTAAAGATT TGCGCCGATT AAATGAGGAC
TTTTTGAAGT TCAATGACTT GTTGGCTAGA TCTAGACAGA TAGTCAAGTT TATTGAGAAG
CAAGATAAAT CCGACAGAAG ACGGATATAC TTGAGCATCG GCTTCTTTTT GCTCTGTTGT
TCATGGGTGG TGTACAAACG AATCTTGAGA ACGCCATTAA GATTGTTGTT ATGGTCGTTC
TTTAAGATTT TCCGTATTTT CAACTGGCTC TTTGTTTCTC TGGACAGCCT AGAGAAAATG
GGAACTGAAG AGATTCTCAC AGCTATAATG GCATCTTCTA TCTCTACTGA GTCTATTGAA
TCTATAGGGA CTGTGATTGA GAGCTCCGTC ACTTTAGAAA CCTCAGAGAC GATAAGCGAT
ACAATTTTAC TGATGGTCTC TGAAGTCTCT GACGTTGTTT CTTCAGTTGT TAGTTTTATA
GAATCACCTG TTCTTACAAC TACAGAGAGA CTCATGGACG AGCTCTAG
 
Protein sequence
MISHIDIFLK RLDSLSHDIH DNLSQLVQIN QNESIDDAKY ESSKVIRDIN KQLLSYKEYL 
QILHNRLGHS KSDTAVYDQY HSNHKLNNEI IHKQRIERYS LDEKDTFPDS NSQESAREQL
FAHRSKKIQE AKETSVNEQI LKSNKSITTS LQTSRQLLST SVLQSELNID SLDQQTKDLR
RLNEDFLKFN DLLARSRQIV KFIEKQDKSD RRRIYLSIGF FLLCCSWVVY KRILRTPLRL
LLWSFFKIFR IFNWLFVSSD SLEKMGTEEI LTAIMASSIS TESIESIGTV IESSVTLETS
ETISDTILSM VSEVSDVVSS VVSFIESPVL TTTERLMDEL