Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_31403 |
Symbol | |
ID | 4838450 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | - |
Start bp | 716912 |
End bp | 717979 |
Gene Length | 1068 bp |
Protein Length | 340 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640389765 |
Product | predicted protein |
Protein accession | XP_001384432 |
Protein GI | 150865283 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.694508 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTTCAC ATATCGACAT CTTTCTCAAA CGGCTCGACC TGCTCCTGCA TGATATCCAC GACAACCTAT CCCAATTGGT CCAGATCAAC CAGAACGAGT CAATTGATGA TGCGAAATAC GAGCTGTCCA AAGTGATACG AGACATCAAC AAACAACTTC TCAGCTACAA AGAATACCTC CAGATCTTGC ATAACCGGCT CGGCCACTCC AAGTCCGACA CGGCAGTATA CGACCAGTAC CATTCCAAGT ACGTGTTTCT TAAAAGCAAG ACACGTGACT TCCACTTATA TAGCCACAAG CTCAATAACG AAATCATCCA TAAACAACGA ATTGAACGTT ATTCGCTCGA CGAAAAAGAT ACCTTTCCAG ACCTGAACTC TCAGGAATCT GCGCGTGAGC AGTTGTTTGC CCATCGATCA AAAAAAATCC AGGAAGCCAA AGAGACGTCA GTGAATGAAC AGATTCTCAA GCTGAACAAG CTGATTACAA CGTCGCTTCA AACTTCACGA CAATTGCTTT CAACCTCAGT ATTACAGTCG GAGTTAAACA TCGACCTGCT TGACCAGCAG ACTAAAGATT TGCGCCGATT AAATGAGGAC TTTTTGAAGT TCAATGACTT GTTGGCTAGA TCTAGACAGA TAGTCAAGTT TATTGAGAAG CAAGATAAAT CCGACAGAAG ACGGATATAC TTGAGCATCG GCTTCTTTTT GCTCTGTTGT TCATGGGTGG TGTACAAACG AATCTTGAGA ACGCCATTAA GATTGTTGTT ATGGTCGTTC TTTAAGATTT TCCGTATTTT CAACTGGCTC TTTGTTTCTC TGGACAGCCT AGAGAAAATG GGAACTGAAG AGATTCTCAC AGCTATAATG GCATCTTCTA TCTCTACTGA GTCTATTGAA TCTATAGGGA CTGTGATTGA GAGCTCCGTC ACTTTAGAAA CCTCAGAGAC GATAAGCGAT ACAATTTTAC TGATGGTCTC TGAAGTCTCT GACGTTGTTT CTTCAGTTGT TAGTTTTATA GAATCACCTG TTCTTACAAC TACAGAGAGA CTCATGGACG AGCTCTAG
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Protein sequence | MISHIDIFLK RLDSLSHDIH DNLSQLVQIN QNESIDDAKY ESSKVIRDIN KQLLSYKEYL QILHNRLGHS KSDTAVYDQY HSNHKLNNEI IHKQRIERYS LDEKDTFPDS NSQESAREQL FAHRSKKIQE AKETSVNEQI LKSNKSITTS LQTSRQLLST SVLQSELNID SLDQQTKDLR RLNEDFLKFN DLLARSRQIV KFIEKQDKSD RRRIYLSIGF FLLCCSWVVY KRILRTPLRL LLWSFFKIFR IFNWLFVSSD SLEKMGTEEI LTAIMASSIS TESIESIGTV IESSVTLETS ETISDTILSM VSEVSDVVSS VVSFIESPVL TTTERLMDEL
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