| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_31379 |
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| Symbol | |
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| ID | 4839032 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | + |
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| Start bp | 647470 |
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| End bp | 649943 |
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| Gene Length | 2474 bp |
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| Protein Length | 722 aa |
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| Translation table | 12 |
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| GC content | 40% |
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| IMG OID | 640390347 |
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| Product | predicted protein |
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| Protein accession | XP_001384089 |
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| Protein GI | 150865039 |
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| COG category | [A] RNA processing and modification |
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| COG ID | [COG5107] Pre-mRNA 3'-end processing (cleavage and polyadenylation) factor |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.828555 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCATAA ACGACAACAA CAGAAAACGT TTGGCGTTGG ATGTGGTTGG CCAACTAGAG
GAAGATTTAG AGGCAGATCC CTTGAACTAT GCCAAATGGA ACAGACTCAT TAAACATGTG
GTGGCCAAAG ACAAAGAAGA ACAAGTCAGG GCCATCTACA CCAAGTACCT CGGCATCTTC
AAGTCTGACG TATGTATACG CTAAGCTGCT TATTGCTGTT AGAAAGGCAT GCTCATTTTA
GTTCTTGTCA TTTGTATATA ATTAGATACT ATTGTTTGAT ACAATAGTAT AGTACTGCTG
CTGTTGATAC AATAGCAGTC GAAATTCTTC TGTATATATC GGCACTGTCT CTCTGGAAGA
ATTCAAATGG AATAATTAAT AGACACAGAA TCTTATAGAT GAGTTCTATA TCAGGTCTAG
AGCAAAATTA AGCATTGCCT TTCTGGCAGA GTAAATTTCT AATATCGATT TAACAATTAC
TAACATATCT ATAGGGAGAG CAGTGGTGCA AATATATCAA CTACGAGTTG AACCGAGGCG
AGTTCCAAAA GGTAGAATCT CTATTTCACC AGTGTTTCTT GATTACAGAC AACGTAGAAC
TTTGTCGTTT ATACGTATCG TACGTACGTC GTGTCAACGA TGTTATTACT GGTGGTGAAA
AAGCCAGAGG CACGGTCATT CAGGCGTTTG AATTCGCCAT CAACAAAGTT GGAATAGATA
TCAATAGCAC GGCTTTGTGG AATGACTACT TAGAATTCCT CAAGTCGTGG ACTCCTGCTG
CTAGTTGGGA ACAGCAACAG AAAGTTGATT TGATAAGAAA AGTCTACAAA AAGTTTTTGA
TTGTTCCCAC GGAAAACTTG GAGAACTCGT GGTCTCAATA TACTAAATGG GAAAATGAAG
TCAACCCAGC TACAGCAGCC AAGTTCATCT CTGAAAAGTC TGCCGAATTT ATGCTTGCCA
GATCGTGGAA TACCGAATGG CAGAACATCA CCGAAAGGAA GTTGATGAGA GACATTTATC
CGTTCTCAGC TACTGGTGAA AAGGAAAAGA TTATTAGGAA CCAAGTCGGT TATTGGCTCA
ATTGGGTCGA GTTAGAAAAG AAAAATATAT TGGAGTTGAA GGAAGATTTG CTTGAGAAGA
GAATAGCATT TACATATAGA CAAGCTACGT TTGCATTGCC GTTTGTTCCG GAATTGTGGT
TTAAAGCTAG TAAATTCTTG CTTCTTAGTA ATGAGGAAGC AAACATTAAT AGATGTGTAG
ATCTCTTAAG TGAGGGTTTG CTGTTAAACC CCAGAAGTCT TCTCCTTTCA TTTCAGCTAG
CCGAATTGCA TGAAAAGGAC GCTGGATTCG AAAAATCAAA GGATATCTAC AATAATCTTG
CGAAGTGGTT AACTATTGAC TACACCAAAA CTACTGAGCA GTTAGAGTCG CTTAGATCAC
GTTTTGAAAT CCCCAGCAAT GGCGATGACA ACGATGAAAA TGATCCAGAG TCCTTCAACA
ACGACGACGA TATGCAAATA GATACCAAGA AAGTGTACCA ACTCACTTCT GAAGACAAAA
AGCATCTTGC GACTTTGAGT AAGAAACAAA CTGAACTTGC AAAATCTGTA ACATTAGTCT
ACGTGAAGTG GATGACAGCC TCCAAACGAG CAGAAGGAAT TAAGGAGGCA CGTAGTGTTT
TCAAGCTGGC CAAGAAGTTT GCCAGCATAG GCAGTGAGTT GTTCGTGGAA AATGCTCTTT
TAGAGCATTA TGCCGACAAC AAGAAAGTAG CCTTGAAGAT CTTTGATTTG GGTATGAAAG
CTTACGCTAC AGACGGAGAC TTCTTATTTT CCTATTTGGA GTATTTAATC ATGATCAATG
ATGTGGATAA CATCAGAATC TTGATCCAAA CGTCAGACAC CAACCTCACG AAAGACATCG
TTTCTTTAAC TGAAGCAGTA CAACTAGGTC TGTTGAATGA ATACTTGAAG GAGTTGAAGG
AAGATGAGAT TGAAGTGAAG AGAGGCTACT TGAGAAAGTT ATTTAAGCGA TACATTTCCT
ATGCCTCAAA ATATGTTTCT TTGGATGTTG CTCAAAGTTT TGTAAATAAG TACGAGCAAA
CTTTTCCCGA TGACGACCCC ATCGAGTTGT TTAGCGATAG ATACACACAA GGTGACGACA
ACTTGATAGA AAAACTTGAT TTGGGAATTG ATAGTTCTAC ATCTTTGCCG CCCAGCAAGA
AGAGAAAGGT CAATGCTAAG TCTGATATCG AAGACAACAA CAGAGACTTG GACGACCGTG
ACGGTATATT CAGCGCTCCA CAACCACCAG TGTTGGAGCC TGAACAGCCC AGCTCTTTTG
TGGGGCCTAC TATCACCACT CTTTTAGCAG CCTTACCCAA CGCCTCTTAC TTTGGACAGC
CTTCAGAGAG TGTCTTCAAT AGTGAGAAAT TGGTCAAGTT GTTTTCCAAT TTGCCCAACA
TTCCTGTTGA TTGA
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| Protein sequence | MFINDNNRKR LALDVVGQLE EDLEADPLNY AKWNRLIKHV VAKDKEEQVR AIYTKYLGIF
KSDGEQWCKY INYELNRGEF QKVESLFHQC FLITDNVELC RLYVSYVRRV NDVITGGEKA
RGTVIQAFEF AINKVGIDIN STALWNDYLE FLKSWTPAAS WEQQQKVDLI RKVYKKFLIV
PTENLENSWS QYTKWENEVN PATAAKFISE KSAEFMLARS WNTEWQNITE RKLMRDIYPF
SATGEKEKII RNQVGYWLNW VELEKKNILE LKEDLLEKRI AFTYRQATFA LPFVPELWFK
ASKFLLLSNE EANINRCVDL LSEGLSLNPR SLLLSFQLAE LHEKDAGFEK SKDIYNNLAK
WLTIDYTKTT EQLESLRSRF EIPSNGDDND ENDPESFNND DDMQIDTKKV YQLTSEDKKH
LATLSKKQTE LAKSVTLVYV KWMTASKRAE GIKEARSVFK SAKKFASIGS ELFVENALLE
HYADNKKVAL KIFDLGMKAY ATDGDFLFSY LEYLIMINDV DNIRILIQTS DTNLTKDIVS
LTEAVQLGSL NEYLKELKED EIEVKRGYLR KLFKRYISYA SKYVSLDVAQ SFVNKYEQTF
PDDDPIELFS DRYTQGDDNL IEKLDLGIDS STSLPPSKKR KVNAKSDIED NNRDLDDRDG
IFSAPQPPVL EPEQPSSFVG PTITTLLAAL PNASYFGQPS ESVFNSEKLV KLFSNLPNIP
VD
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