Gene PICST_31373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_31373 
Symbol 
ID4838911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp634241 
End bp635539 
Gene Length1299 bp 
Protein Length432 aa 
Translation table12 
GC content42% 
IMG OID640390226 
Productpredicted protein 
Protein accessionXP_001384088 
Protein GI150865038 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGATA TTGCAACTTC GAGGAATACT CGACAACCCC AGCAGTCGGC TCTCCCAGAC 
TTCACCTTCA CCCAGTACGA GCTTACGTGT ATCAAGGAGA CATGGAACGC TCTCAAAATC
ACTAGAACCG TCGACAGCAT GTCTCTGGCC CGAGTTCCAG CCAATAACTC GAAGGAGAGC
CTACATAATA GCGATAAAAA TACCAGCAAA GATGCAAATG TGAATGGTAG CAAGAACAGT
GATAACAGCA GTAGCACACA ACCATTGCCC AAGTCTTCTG GACCTGTGCA TATGAAGAGG
TCTAACATCG ACGACCATAT TCTCAATTTA GAGAAGTTCC ACAGTACTCT ATGTGGACAT
ATCTTCCAGA TCGAGAACGA TTTGCCAGAA AACTTGAAGA GAAACGACTT CCACAGAAGT
CTGTTGGAGC ACTACAATCA GACAATCTCG AACTTTCACT ACGAGATGAT CCAGACAAGT
TATCAGGTAA CCCACATGGT GCAGCTTATC TCGATCATGA TCAACTGTCT TGAATTCAAC
AAGTCATTAC CAGTAGCTTA CATCACCAAA GTGAGTAAAG TCAACTACAG AATCCACGAC
ATGGACGCCT TGGCTTATAA GGTATTTGGT GAAGCGTTGA TCATGACGGT TATTGAAGTT
TCCAACGAAA GCAACAAATC TAGCTGTATC TGCGAAGCTT TTACTATCAA ACACCAGGCG
ATCTTCAATA AGTTTATATC CAAATTGTTG AACATTTTGA TCTACTATGG CTTCGACGAA
ATGTTAGGAA TGAACTCTGC CGTCAACGGC ACCAAAGCAT CAGCAAACTT ACAGAGAAAC
TCATATATGT CTCTATCTAG CTCTGTCTCA GCTTCGCTGG CTTCTTCGAG AATCGCACTC
ACCAGAGTTC AAAGCGAAAT CTCTACCAAG TCATCACAGT TGTCGTTATA CTCTGGAATC
GACGAAACTG CTTCTTCTAT TGGCATTTCA GACTTCGAAT ATGCTTCAGA AAAACCAACT
AACACTCACA GCATTACCAC AGCATTTGGT CTTGACAAGT TCAATTCCAA ATCGGAACCA
AAGACATTTG AAGATATCAA AGAATCAGAC GAATACGAAT CCTTTGAGGA AGAGGACGAT
TCTTTCGACA TGCTCAACTC TTTTGCTCCA CCAACAGCCA AGACCAGCAA AAACTTGTTC
AAGAAGAACA CATCAAACAA GCAAATGCCT AAAAATCAAC GCTCACTGGG AAGAGTGCCT
GTTCATGACG ACACTCAGGA TAACTGTACA ATAATGTAG
 
Protein sequence
MSDIATSRNT RQPQQSALPD FTFTQYELTC IKETWNALKI TRTVDSMSSA RVPANNSKES 
LHNSDKNTSK DANVNGSKNS DNSSSTQPLP KSSGPVHMKR SNIDDHILNL EKFHSTLCGH
IFQIENDLPE NLKRNDFHRS SLEHYNQTIS NFHYEMIQTS YQVTHMVQLI SIMINCLEFN
KSLPVAYITK VSKVNYRIHD MDALAYKVFG EALIMTVIEV SNESNKSSCI CEAFTIKHQA
IFNKFISKLL NILIYYGFDE MLGMNSAVNG TKASANLQRN SYMSLSSSVS ASSASSRIAL
TRVQSEISTK SSQLSLYSGI DETASSIGIS DFEYASEKPT NTHSITTAFG LDKFNSKSEP
KTFEDIKESD EYESFEEEDD SFDMLNSFAP PTAKTSKNLF KKNTSNKQMP KNQRSSGRVP
VHDDTQDNCT IM