Gene PICST_31353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_31353 
Symbol 
ID4838424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp587275 
End bp588069 
Gene Length795 bp 
Protein Length264 aa 
Translation table12 
GC content41% 
IMG OID640389739 
Productpredicted protein 
Protein accessionXP_001384074 
Protein GI150865024 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.255969 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGATC CTAACCCTAG CTTGATATTC ACATTCATCC CCAGCAGCTC GACCAATATC 
AAAATCGACA CCAAGCCGCT CAATATAACG TATCCCAACT CTACCATTAC ATTGGAAGCC
GGTCTTCATC TTTTGCAAAT TGTTCTGGAT AACAATGTCA CCATAGCCTC GTTCTTAGAA
TGTCTACCTC ACAAGAAGTA CTCAATAAAC AGAACTCTTA GTGGAGATTA CTATATCAAA
GTAATAGATC CTAATTCACG ACTAATGACC TTCTCCATTC CGTTTGAACC AGATGCGGAA
TGGGCGGAAT TGACCTGCTA CTTGGATATA GACTATTTGT CGAATGTCAC AGGCATTGGA
ACTTCGTCTT ATGGCACTCA AATTTTCAAG TCAGATTCAA GTGGTGCAGA ACTCGAGCAG
AATCTCATAT ATCCTCCAGT TTTGACTAAA CAAGACTTTC TCAGACAACT TCAAATCTCC
TTCCTTTTGT CAACAGCATT CAACAGTGAA AAGTCGTATA ACTACTGGTC TGGATTGTTA
GCAGGAGTGC CAGAGCTGCC GTACTTTGAA CGCAATCGAG CGTTCGTGCT AAACTTTCTT
GACTTGTTGA CAATTCAAGT CAAAGTCGGA AATTCAAACC ATAAGCAAAT ATTGCAAAAC
CTAGTAGCGC CATTATCAAC AGTTTTTCAA CCTCCAGAGT TGAACTACAA AAACACATGC
TGTGGAATAC TTAAGTTGGA TGGTGTAACT GCTGACAAGT GGGTGCAAAT CCGGACGCTA
ATCTCAACAG ACTAA
 
Protein sequence
MPDPNPSLIF TFIPSSSTNI KIDTKPLNIT YPNSTITLEA GLHLLQIVSD NNVTIASFLE 
CLPHKKYSIN RTLSGDYYIK VIDPNSRLMT FSIPFEPDAE WAELTCYLDI DYLSNVTGIG
TSSYGTQIFK SDSSGAELEQ NLIYPPVLTK QDFLRQLQIS FLLSTAFNSE KSYNYWSGLL
AGVPESPYFE RNRAFVLNFL DLLTIQVKVG NSNHKQILQN LVAPLSTVFQ PPELNYKNTC
CGILKLDGVT ADKWVQIRTL ISTD