Gene PICST_31342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_31342 
Symbol 
ID4838962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp558868 
End bp559899 
Gene Length1032 bp 
Protein Length343 aa 
Translation table12 
GC content46% 
IMG OID640390277 
Productpredicted protein 
Protein accessionXP_001384068 
Protein GI126135088 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0024] Methionine aminopeptidase 
TIGRFAM ID[TIGR00501] methionine aminopeptidase, type II 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTATC CACTTGAAGT CAATTCTCAC CGTACCACTT CTGAGGAGTT AAGATACTTG 
GACAGACAGC AGAACAACAG ATGGGAAGAT TTCCGTAAAG GAGCCGAGAT CCACAGACGT
GTACGTCACA AGGCTCAATC GTCCATCAGA GCCGGAATGT CCATGACTGA AATTGCTGAC
TTAATAGAGA ATTCTGTGAG AAGCTACGCT GCTGCAGACC ACACATTAAA AGCTGGTATA
GGATTTCCAA CTGGTTTGTC ATTGAACCAT GTCGCTGCCC ATTATACCCC CAATACTGGA
GACAAGTTGT CTCTCGGTAA AGATGACCTT ATGAAGGTAG ATATAGGAGT CCATGTCAAT
GGCCATATTT GTGACTCAGC CTTTACGATG ACTTTGAATG ATACTGGGAA ATACGACAGT
ATCATGAAGG CTGTCAAGGA TGCCACCAAC ACTGGTGTGA AGGAGGCTGG TATTGATGTC
AGACTCAACG ATATCGGTGA AGCCATTCAG GAAGTGATGG AGTCGTACGA AATGGAGTTG
GACGGAAAGA CATATCCTGT CAAGTGTATC AAGAACTTGA ACGGACACAA CATTGGTGAC
TACATCATCC ATTCCGGTAA AACCGTACCT ATTGTAGCCA ATGGGGATAT GACGAAGATG
GAAGAGGGTG AGACTTTCGC TATTGAGACG TTTGGATCGA CCGGCAGAGG CTATGTCCTC
ACCGAGGGTG AATGTTCGCA CTATTCTCGA AACCAGAACA TCGACGGCAT CCGTGTTCCT
TCCGAAAGAG CAAAGACATT GTTGAACTCT ATCACATCCA ACTTCGGAAC ATTGCCCTGG
TGTCGTAGAT ACTTGGAGAG AACCGGTGAA GAGAAGTACT TGTTCGCTTT GAACCAGTTG
GTCAGAGCAG GGATCGTGGA AGAATACCCT CCTCTTGTAG ACATCAAAGG CAGTTACACA
GCACAGTACG AGCACACCAT CTTGTTACAT CCCCACAAGA AGGAGGTTGT CACCCGTGGT
GATGACTACT AG
 
Protein sequence
MEYPLEVNSH RTTSEELRYL DRQQNNRWED FRKGAEIHRR VRHKAQSSIR AGMSMTEIAD 
LIENSVRSYA AADHTLKAGI GFPTGLSLNH VAAHYTPNTG DKLSLGKDDL MKVDIGVHVN
GHICDSAFTM TLNDTGKYDS IMKAVKDATN TGVKEAGIDV RLNDIGEAIQ EVMESYEMEL
DGKTYPVKCI KNLNGHNIGD YIIHSGKTVP IVANGDMTKM EEGETFAIET FGSTGRGYVL
TEGECSHYSR NQNIDGIRVP SERAKTLLNS ITSNFGTLPW CRRYLERTGE EKYLFALNQL
VRAGIVEEYP PLVDIKGSYT AQYEHTILLH PHKKEVVTRG DDY