Gene PICST_31311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_31311 
Symbol 
ID4839053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp489085 
End bp489798 
Gene Length714 bp 
Protein Length237 aa 
Translation table12 
GC content45% 
IMG OID640390368 
Productpredicted protein 
Protein accessionXP_001384053 
Protein GI150865009 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.715057 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCCA CTCCTTCGCC TACGAAGAGG TCCGTGTTAT CCCCCAAGCC TTCCAACATC 
TCCACTCCCT CGAGAAAGAA CGGCACACCC ATCTTTGTCT CATCCAAGTT GTCACCTGTG
AAAACCATTC CTTCCAGATT GACGCCTTCT CCCAAAAAGC CGAAGTTGAA CTTCACCATC
TGGGAAGACA AAACACAGCC ACAACAGCCA GAAATCTCCG AAGACTACAT TTTCTCAAAC
AAGCAAAACC ACAATGACCA GGAGAACATC TTGCAACCTA AAAAGAACCC CGCTGTCACG
GTGAACAGAC GTTCGCCAAC CAGAGAGCCA TTAGGAAATT TGAATATCCA CGATTTCCCT
GGCCACGTAA CCTACGGTAG TGCTACTTCT TTGCAATTGA CTGAACTCTA CCAGCCTACG
CATTACAACA ACGAATTCAA GTCGTTGCAC AAGTTCCTGA ACATCCCTAG CTTCTTGACT
CCAACTAGAA AAAATAACTC TAACATGGAG AAGTACTTAG TAAAGTCGCT GTCTGCTGTA
TACACCGAAG ATGACGAGAT CGATCTTGAA CTCGACGATG CTGAAATGAC TTTGGTCAAG
AAACAATTGA CACAAAACTC GACTAGAAAA CATAGACGCT CCTATTCTGT AGGCAAAAAT
GACTCCAAGC TGGGCTTGAT CAGAAGGAAC AACTTCACAA TCTTGTCCAA CTAG
 
Protein sequence
MSATPSPTKR SVLSPKPSNI STPSRKNGTP IFVSSKLSPV KTIPSRLTPS PKKPKLNFTI 
WEDKTQPQQP EISEDYIFSN KQNHNDQENI LQPKKNPAVT VNRRSPTREP LGNLNIHDFP
GHVTYGSATS LQLTELYQPT HYNNEFKSLH KFSNIPSFLT PTRKNNSNME KYLVKSSSAV
YTEDDEIDLE LDDAEMTLVK KQLTQNSTRK HRRSYSVGKN DSKSGLIRRN NFTILSN