Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_31311 |
Symbol | |
ID | 4839053 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | + |
Start bp | 489085 |
End bp | 489798 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 12 |
GC content | 45% |
IMG OID | 640390368 |
Product | predicted protein |
Protein accession | XP_001384053 |
Protein GI | 150865009 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.715057 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGCCA CTCCTTCGCC TACGAAGAGG TCCGTGTTAT CCCCCAAGCC TTCCAACATC TCCACTCCCT CGAGAAAGAA CGGCACACCC ATCTTTGTCT CATCCAAGTT GTCACCTGTG AAAACCATTC CTTCCAGATT GACGCCTTCT CCCAAAAAGC CGAAGTTGAA CTTCACCATC TGGGAAGACA AAACACAGCC ACAACAGCCA GAAATCTCCG AAGACTACAT TTTCTCAAAC AAGCAAAACC ACAATGACCA GGAGAACATC TTGCAACCTA AAAAGAACCC CGCTGTCACG GTGAACAGAC GTTCGCCAAC CAGAGAGCCA TTAGGAAATT TGAATATCCA CGATTTCCCT GGCCACGTAA CCTACGGTAG TGCTACTTCT TTGCAATTGA CTGAACTCTA CCAGCCTACG CATTACAACA ACGAATTCAA GTCGTTGCAC AAGTTCCTGA ACATCCCTAG CTTCTTGACT CCAACTAGAA AAAATAACTC TAACATGGAG AAGTACTTAG TAAAGTCGCT GTCTGCTGTA TACACCGAAG ATGACGAGAT CGATCTTGAA CTCGACGATG CTGAAATGAC TTTGGTCAAG AAACAATTGA CACAAAACTC GACTAGAAAA CATAGACGCT CCTATTCTGT AGGCAAAAAT GACTCCAAGC TGGGCTTGAT CAGAAGGAAC AACTTCACAA TCTTGTCCAA CTAG
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Protein sequence | MSATPSPTKR SVLSPKPSNI STPSRKNGTP IFVSSKLSPV KTIPSRLTPS PKKPKLNFTI WEDKTQPQQP EISEDYIFSN KQNHNDQENI LQPKKNPAVT VNRRSPTREP LGNLNIHDFP GHVTYGSATS LQLTELYQPT HYNNEFKSLH KFSNIPSFLT PTRKNNSNME KYLVKSSSAV YTEDDEIDLE LDDAEMTLVK KQLTQNSTRK HRRSYSVGKN DSKSGLIRRN NFTILSN
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