| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_31308 |
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| Symbol | |
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| ID | 4838685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | - |
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| Start bp | 473726 |
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| End bp | 475354 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 12 |
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| GC content | 39% |
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| IMG OID | 640390000 |
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| Product | predicted protein |
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| Protein accession | XP_001384386 |
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| Protein GI | 150865247 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5271] AAA ATPase containing von Willebrand factor type A (vWA) domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0207717 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTTAA CGGCTGGATA TGAAGATGGA ACGTTCCATT ATACCCTCAC CAAGAAATCT
ATATCTGGAG TGTTTCGTAC TCGTGCTGCT TCAAACGAGA ATATTGAGGA AGAGGAGTAT
GCGAGTGTCA TACAAGAACT ATTTCCACTT GACAATGAGG ATGTACTTGA GCAGGAGAGG
AAATATCCGA ATCTCCAGCT TTCAGTAAAG ATTTCTGCTA AAGCAGAATA CTACGACGCT
GAAACCAAAG AATTGATAGA GGAAGATAAT GATCCCAATC AGAATCCGGT AGAATTGTCA
ATAAAGACAG ACTCAAGGGT CCCTGTGACT GTTGCCATAA TTGAACTTAC ACCAGTAAAC
TTAGAGGAAG AACCACATCT CAAGGACGAA GGCAATCTCT TCAATTGGAT GGACTTACTA
TTAACGCAGA ACCAGAGTAT GGTATCGCAG ATTAAAAGCT TGCAGAAGAC AATAGAGACT
TTAAAAGAAG AAAACTTCCA AATGCACAAC GGCTACCAGA TCGCTAAGAA TGAGTACAAG
TTTATCATAG ATGATCTAGA GCAGAAGTTC TACCAAGTAT TGAATGCTAA GAAAGATAAA
ATATGGGAGT TGACCAAGAA AACCGTACCG ACAAATCGAG TCGAACATTT AAACCAAGAA
TTTCTCAAGG ATTCGTCGAA GCTAGTAGCA ATTGATAAAG ATATGATTCC GGATAAACTC
GACGATAAGT ACTTGAAGCA GAGGAAGAGA AAGACAGAAA CCAAAACTGA GGGTCTGCCA
AAGAAAAGAG CCAGACGAGG AAGGAAAAAG GCAGAATCTG AGGAACAAGA GGTCGAAGAG
AACAAAAAAG ATATTACAGT AAAAGAAGAA GAAGAAGAAG ATTTAGACGT AGTGGCACCA
AGAAGAAGAT CATTACGTAG AAGAAGTGAT GTAATAGTGA AAAAGGAACC AGATAGTCAA
GCACCATTAA TCAATAGTTT CTCGGACCGA GAGATATTGA ACAGCGTTCT CGAAAAAAGC
GAGGATGATG AAGAAGATGA AGAAGCAAGT GAACACGAAG ATGGCGATGA GTATGATGAT
GACAATGATT TGTACGAATC AAACCATAGT GACGATGATT ATGTGGAACA TGATGAAGAT
GAAGAAAAGA TTGAAAATGA AAACACACAG CCGGATTTTG GCAAATCTGT AGATACAGTT
GATTTAGAGG CTGGGAAAGA TAAAGATTCT GAGAAGTTAG TTCTGGATAG TACAGATATT
GTTTCAGACA GTCTTGAAGG GCAGATACAG AGATCTAAGG TGGTTTTGGA CTTTGAATCT
TCCGAGAGAA TCCAATTGAC CGGTGTAAAG GAAGAGCGAA AGGAAGAAAA TGAAGAGTCT
AATGAAGCTA ACGCTAGTCA AGAAGCCTTG GAGACAGATT ACGGTTCTTC AGATGATCAG
GAACAAAATA ATCATGAAGA AGACGAACTT GAAACTAGAA ACATTAGAAA CAATGGAGGT
GACATTAGTG AAGAAGAAGG CAAGATTGGA GACAATGCAA ATAAAGCAGA TACCAACGCC
GATGCAGATA AGCAGGTGGA TGCGAATCTG AAAGATGCGG AGACGGATTA TTCCTCCGAT
GAAGATTAA
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| Protein sequence | MSLTAGYEDG TFHYTLTKKS ISGVFRTRAA SNENIEEEEY ASVIQELFPL DNEDVLEQER
KYPNLQLSVK ISAKAEYYDA ETKELIEEDN DPNQNPVELS IKTDSRVPVT VAIIELTPVN
LEEEPHLKDE GNLFNWMDLL LTQNQSMVSQ IKSLQKTIET LKEENFQMHN GYQIAKNEYK
FIIDDLEQKF YQVLNAKKDK IWELTKKTVP TNRVEHLNQE FLKDSSKLVA IDKDMIPDKL
DDKYLKQRKR KTETKTEGSP KKRARRGRKK AESEEQEVEE NKKDITVKEE EEEDLDVVAP
RRRSLRRRSD VIVKKEPDSQ APLINSFSDR EILNSVLEKS EDDEEDEEAS EHEDGDEYDD
DNDLYESNHS DDDYVEHDED EEKIENENTQ PDFGKSVDTV DLEAGKDKDS EKLVSDSTDI
VSDSLEGQIQ RSKVVLDFES SERIQLTGVK EERKEENEES NEANASQEAL ETDYGSSDDQ
EQNNHEEDEL ETRNIRNNGG DISEEEGKIG DNANKADTNA DADKQVDANS KDAETDYSSD
ED
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