Gene PICST_31306 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_31306 
Symbol 
ID4838684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp468481 
End bp469299 
Gene Length819 bp 
Protein Length272 aa 
Translation table12 
GC content41% 
IMG OID640389999 
Productpredicted protein 
Protein accessionXP_001384051 
Protein GI150865008 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0747954 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTCTT TAGAATCACT CAAGACTATA GAGCATATTC TACAACAATA CACGGATGAT 
CTCAACGCTC TTTCGATTCC GTCATTGCAG GATTTTGCCT CGACTCCTAC TCTGTCCGCA
TTCGCTCAGT CTCCATACTT GAACAAGTAC AAGCTACAGC AGCTAGAGGT GAATCTTCAG
CATCTACGGA GCCAATTGCT TGCTATAAGT TCACACAACA ACAAGAACTA TACAGAATTG
ACACTGAAAT TAAACCAACT TGTAAACGAT ACTCTTGAAG AAAAGAGATA CGTGAATTCA
CAAATGATAC AACTTTTCGA TAGCCAGAAT CAGACTTTGA TCCAGAAAGA TATACCGACA
GTGACTTCCG ACTCCGATAC AAAACAGTCG CAGCTTCAGA AACTGGTCAA GCTGGAAGAA
GAAGATCTTC CTTCATTGCG CCAGAGATTG CTACATGGGG GAAAACATAC TCAACTTCTA
GACGAAAGGG ATCACGAAAA ACTCAACGAT TACCACGAAT CGATTCAGGA CGACATCATC
AACGAGTTGT CCGAGTTAAC GACTACATTG AAGAACTCGG CATATACACT TAGTCAGAAA
ATCCTTTCGG ACGATTTGAG TATTCTCAAC GAAACCAACG AGAACATGAT TAGAAATTCC
AACTTGTTCA AAGTTATCGA CAAGAACTTG AACAACTATC TTGAAAACAA GACAGGAGGC
AAGATAGGGT TGTTCATGTT GATCAAGTTG ACCGTGGGTA TTGTGGTTGG TTTTCTCTTT
ATGATCCTCC TCATCAAGAT CATTCCACAA ATAGGTTAG
 
Protein sequence
MSSLESLKTI EHILQQYTDD LNALSIPSLQ DFASTPTSSA FAQSPYLNKY KLQQLEVNLQ 
HLRSQLLAIS SHNNKNYTEL TSKLNQLVND TLEEKRYVNS QMIQLFDSQN QTLIQKDIPT
VTSDSDTKQS QLQKSVKSEE EDLPSLRQRL LHGGKHTQLL DERDHEKLND YHESIQDDII
NELSELTTTL KNSAYTLSQK ILSDDLSILN ETNENMIRNS NLFKVIDKNL NNYLENKTGG
KIGLFMLIKL TVGIVVGFLF MILLIKIIPQ IG