Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_31306 |
Symbol | |
ID | 4838684 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | + |
Start bp | 468481 |
End bp | 469299 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640389999 |
Product | predicted protein |
Protein accession | XP_001384051 |
Protein GI | 150865008 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0747954 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTCTT TAGAATCACT CAAGACTATA GAGCATATTC TACAACAATA CACGGATGAT CTCAACGCTC TTTCGATTCC GTCATTGCAG GATTTTGCCT CGACTCCTAC TCTGTCCGCA TTCGCTCAGT CTCCATACTT GAACAAGTAC AAGCTACAGC AGCTAGAGGT GAATCTTCAG CATCTACGGA GCCAATTGCT TGCTATAAGT TCACACAACA ACAAGAACTA TACAGAATTG ACACTGAAAT TAAACCAACT TGTAAACGAT ACTCTTGAAG AAAAGAGATA CGTGAATTCA CAAATGATAC AACTTTTCGA TAGCCAGAAT CAGACTTTGA TCCAGAAAGA TATACCGACA GTGACTTCCG ACTCCGATAC AAAACAGTCG CAGCTTCAGA AACTGGTCAA GCTGGAAGAA GAAGATCTTC CTTCATTGCG CCAGAGATTG CTACATGGGG GAAAACATAC TCAACTTCTA GACGAAAGGG ATCACGAAAA ACTCAACGAT TACCACGAAT CGATTCAGGA CGACATCATC AACGAGTTGT CCGAGTTAAC GACTACATTG AAGAACTCGG CATATACACT TAGTCAGAAA ATCCTTTCGG ACGATTTGAG TATTCTCAAC GAAACCAACG AGAACATGAT TAGAAATTCC AACTTGTTCA AAGTTATCGA CAAGAACTTG AACAACTATC TTGAAAACAA GACAGGAGGC AAGATAGGGT TGTTCATGTT GATCAAGTTG ACCGTGGGTA TTGTGGTTGG TTTTCTCTTT ATGATCCTCC TCATCAAGAT CATTCCACAA ATAGGTTAG
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Protein sequence | MSSLESLKTI EHILQQYTDD LNALSIPSLQ DFASTPTSSA FAQSPYLNKY KLQQLEVNLQ HLRSQLLAIS SHNNKNYTEL TSKLNQLVND TLEEKRYVNS QMIQLFDSQN QTLIQKDIPT VTSDSDTKQS QLQKSVKSEE EDLPSLRQRL LHGGKHTQLL DERDHEKLND YHESIQDDII NELSELTTTL KNSAYTLSQK ILSDDLSILN ETNENMIRNS NLFKVIDKNL NNYLENKTGG KIGLFMLIKL TVGIVVGFLF MILLIKIIPQ IG
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