| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_31242 |
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| Symbol | |
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| ID | 4838587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009044 |
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| Strand | - |
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| Start bp | 305205 |
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| End bp | 306476 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640389902 |
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| Product | predicted protein |
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| Protein accession | XP_001384357 |
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| Protein GI | 150865226 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0566] rRNA methylases |
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| TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGGAACT TGGACTCGTC CCCCATAAAG CCTGTGTTCA AACCTCACTA TCTGAATCCA
GGCAAAACCA AGAGCTTCGA GAAGAGTTTA CCCTACTCAG AGACCAAGAT GAAACCTTGG
GAGGTCCAGA ACATCTCGAA GGACGTGTTT TTCCAAAGAA AATACGGAAA TATAAGTCCC
GAAGAGAGAA ACAAACTCAC CGAAAAGGTC GCTAGACAGA GACGACTTAG AAATATGAGA
AAGGAACATG AACGAGAACA AAGGGAAAAT GCCAGAGCTG AAAGAATGGC AAAATCAGGC
AGGGAAAACC ACAGCGACTC TGAACAGTAT CGTGTGTCTA GAGATCGTAC ACCTATAGGA
AAGAATTCAC TTTTTGAATA TGTCTATGGA ACTCATTCAG TTAGATCAGC TTTGGAGTCT
GGTAAGAGGT CGTCCTACAG TCGACTTTAT GTACATAATT GCCAGGATAG ACAGTTAATC
AAGATTGCAG AGACAAAGTA TGGCGTAAAA ATTGTGGAAA GATCTAGCAA GAACGACTTG
AACATCTTGT GCAACAACGG AGTACATAAC GGAGTAGTAT TGGAAACCAA GAGTTTGGAG
CTCAATACCA TTCATTCGCT TGGAGCTTGT CAAGATAACG AGTATAAGGT TACGGTGTAC
AATGATCTTG ACGATGCTGA AGTAGAGATA GTCAAGACAG TGGCCAGAAC AGACCCTGTA
GAAGATGAAC CTGTAGCCAA GATGCCTTTG GGAATCTTTC TCGATGGCAT CACTGATCCT
CAGAACATGG GAGGCATTAT CAGATCTGCC TACTACTTTG GAGTTGATTT CATCGTGGTT
CCTGGAAGTC ACACTGCCAG GCTTGGACCC GTGGCCAACA AGGCGTCCGT GGGTGCTATG
GACTTGATTG ATATCTACGA GACGAACGAG AGCTTGAAGT TCATCGACAG AATCAGAGCC
AATGGCTGGA GTGTGGTTTC AACTAGTGCA AAGCCATCAG TAGATGAAAT CAATGACTTG
AAGTCTAAGC ACGAAAAAGT GGAACAGCAG TTGAAGAACA AGTATGTCGA TATGAACGAG
CTTCCTAACA TTCTCAGCCA GACTCCTGTA TTACTTGTCA TGGGAAGTGA AGGAGAAGGA
ATCAGAACAC ATATGAAGTT GAGGTCCGAC TTTTTGGTCG GAATCGACAA GGGCAGAAAA
CAGGATCATA TCGTCGACTC GTTGAATGTC AGTGTTGCTT CAGGTATCTT GATCGGCAAA
TGTCTTGAGT GA
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| Protein sequence | MRNLDSSPIK PVFKPHYSNP GKTKSFEKSL PYSETKMKPW EVQNISKDVF FQRKYGNISP
EERNKLTEKV ARQRRLRNMR KEHEREQREN ARAERMAKSG RENHSDSEQY RVSRDRTPIG
KNSLFEYVYG THSVRSALES GKRSSYSRLY VHNCQDRQLI KIAETKYGVK IVERSSKNDL
NILCNNGVHN GVVLETKSLE LNTIHSLGAC QDNEYKVTVY NDLDDAEVEI VKTVARTDPV
EDEPVAKMPL GIFLDGITDP QNMGGIIRSA YYFGVDFIVV PGSHTARLGP VANKASVGAM
DLIDIYETNE SLKFIDRIRA NGWSVVSTSA KPSVDEINDL KSKHEKVEQQ LKNKYVDMNE
LPNILSQTPV LLVMGSEGEG IRTHMKLRSD FLVGIDKGRK QDHIVDSLNV SVASGILIGK
CLE
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