| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_31232 |
|---|
| Symbol | |
|---|
| ID | 4839018 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009044 |
|---|
| Strand | + |
|---|
| Start bp | 274299 |
|---|
| End bp | 275249 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640390333 |
|---|
| Product | hypothetical repeated ORF |
|---|
| Protein accession | XP_001384012 |
|---|
| Protein GI | 150864977 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0123925 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTAAAA CTTGCATCAC GTTAAAAAAA AATACTGTGA TGGATATAGA CGCCATCAAT
CAACTGGAAG GGCCTCCTGG AGACTCTTCC CACTTCAACG CTTCAAATAG TGCTTTAAAC
GAACCGAAAC CGCCAGATAT TGGCCGAAAA CGAAAAACCG ACGTCGCACC CGATGACCTG
ATGGACCTTG ATGGCGAGTC CTCAGATGCC GTAGAAAACG GCGAATTGGA GCCATCTTTC
GTGACAGCAG GATCAGTTAT TGCTGATGAC TCTTTTGACG ATACCCAAGA AGCCTCAAAC
GCTTTAAACA CCTTGAACGA AGGGCCAGAA ATGTCGACTA TGGACAGCTT TGAAACCTCA
GTTTCGAAAA ATTCTTCACG TCACGTGATC GAGGAAGAAC ACGACCCAGT TTTGGCTGCA
AAAGGAGATA CTGTTATGAT ATCTCCAAGT CCTACTTCCA GTAGCGATTT GTCAAAGCCT
ACATCCACCA GTGACTCAGT TGAAATTACA AATGTTTATA TTAAAGAAAA AAACCCAAAA
TCCCAAAAAA ATAACCTTTC AGAAAATGAA GAAATCAAAA AAAATCAGGA AAACAGAAAA
TCAAAAAAAC AAACCTCAGG AGCTCCTCTT ACTGATCTGA TCTGGAACGG TCAGAACGCC
TCGCTCCAAC ATCACAAAAA CAATTCATCA ATTAAACTTC TCTCCAAAGA CAGGTTAATC
AAGGATCTTG AAAAACTCGG ATCTGGCTTA AACAAGAATT GGGAAGAAGA TAAATTCACT
GACGACTTGA CCTTTAAGAA GATCAGAAGG TTAGGATTTG CCAAAAACTA TGTCACTTCC
CACTCACAAC AAGAATGGGC AGGCGAACAG GGCAGAATTG ACAGATGGAA CATCCCGCAA
GAATTTGCGC AATCCTCCGG ACCTTCAATT GTGGGAAAAG CGGATGGATG A
|
|---|
| Protein sequence | MTKTCITLKK NTVMDIDAIN QSEGPPGDSS HFNASNSALN EPKPPDIGRK RKTDVAPDDS
MDLDGESSDA VENGELEPSF VTAGSVIADD SFDDTQEASN ALNTLNEGPE MSTMDSFETS
VSKNSSRHVI EEEHDPVLAA KGDTVMISPS PTSSSDLSKP TSTSDSVEIT NVYIKEKNPK
SQKNNLSENE EIKKNQENRK SKKQTSGAPL TDSIWNGQNA SLQHHKNNSS IKLLSKDRLI
KDLEKLGSGL NKNWEEDKFT DDLTFKKIRR LGFAKNYVTS HSQQEWAGEQ GRIDRWNIPQ
EFAQSSGPSI VGKADG
|
|---|
| |