Gene PICST_31230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_31230 
Symbol 
ID4839016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp270346 
End bp271155 
Gene Length810 bp 
Protein Length269 aa 
Translation table12 
GC content46% 
IMG OID640390331 
Productpredicted protein 
Protein accessionXP_001384350 
Protein GI150865222 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTCAT TAACTTCATC TACGTCGTCC TTCACCACCC CCGTTATGAC AGTCCCGGCT 
AGTGGTAACA ACCCATATAT TCTCAGACAG GAGAACCCAA GTGGAACTGT GTTTATAGCT
GTAGGTGCTT GTGTAGGTGC CATCTTCCTC GGGTTTATCT TGTACCACTT GATCGTGTCG
TTCACAGCAT CCAGATTGGC TAAGAAAACG ATGGCTTCAG AGAAACAACT TTATGCCACT
TACCAAAATA ACAATGGCTC CGCTTATGGA TTTGGTCCTG ATGGTTCTAC CGGTACTACC
CTCAACTACA ACTCGGAATA TCAACCTTCT GTAGCTAAGC TACCATTGTT GACTCCTAGT
AAATCTGTAC TTGGTAGCTT AGGAGGAGGA ATGGGATATT CCTTTGGTGG CTCTCAGTTG
GGGGACACTT CTACCATCTA CCAATCAGAA GCTGCTGGTC CTACTACCAA ACATGACATG
ACCAAGATGT TCATCTCGCC TACTGCCGAA GTAATGCAAC ACAAGAGAGT CAAGTCTTCG
CTGTATGGAG GCTCAGTGAC GAACTTGTCT TTTGCTGGTG CTTCCACTAC AAACTTGGTA
CCTGGTCAGG GTACTAATAG AAACTCATTC TATGGCATTT CTGAGGCTAA CAACAGCGAC
TATTCGGTTC TACTTGGTCA TAGTCGTGCA GGCCCCTTGT TGTCATCGCC AGGCATGCCT
GCTGCTGAAG GTCCTTCTGC TCCCAGAAAG ACGATTCCTT CGATGTACCT TGAGGACTTA
ATGGACAACA AGTCTACTCA TGACATGTAG
 
Protein sequence
MPSLTSSTSS FTTPVMTVPA SGNNPYILRQ ENPSGTVFIA VGACVGAIFL GFILYHLIVS 
FTASRLAKKT MASEKQLYAT YQNNNGSAYG FGPDGSTGTT LNYNSEYQPS VAKLPLLTPS
KSVLGSLGGG MGYSFGGSQL GDTSTIYQSE AAGPTTKHDM TKMFISPTAE VMQHKRVKSS
SYGGSVTNLS FAGASTTNLV PGQGTNRNSF YGISEANNSD YSVLLGHSRA GPLLSSPGMP
AAEGPSAPRK TIPSMYLEDL MDNKSTHDM