Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_31230 |
Symbol | |
ID | 4839016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | - |
Start bp | 270346 |
End bp | 271155 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 12 |
GC content | 46% |
IMG OID | 640390331 |
Product | predicted protein |
Protein accession | XP_001384350 |
Protein GI | 150865222 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTCAT TAACTTCATC TACGTCGTCC TTCACCACCC CCGTTATGAC AGTCCCGGCT AGTGGTAACA ACCCATATAT TCTCAGACAG GAGAACCCAA GTGGAACTGT GTTTATAGCT GTAGGTGCTT GTGTAGGTGC CATCTTCCTC GGGTTTATCT TGTACCACTT GATCGTGTCG TTCACAGCAT CCAGATTGGC TAAGAAAACG ATGGCTTCAG AGAAACAACT TTATGCCACT TACCAAAATA ACAATGGCTC CGCTTATGGA TTTGGTCCTG ATGGTTCTAC CGGTACTACC CTCAACTACA ACTCGGAATA TCAACCTTCT GTAGCTAAGC TACCATTGTT GACTCCTAGT AAATCTGTAC TTGGTAGCTT AGGAGGAGGA ATGGGATATT CCTTTGGTGG CTCTCAGTTG GGGGACACTT CTACCATCTA CCAATCAGAA GCTGCTGGTC CTACTACCAA ACATGACATG ACCAAGATGT TCATCTCGCC TACTGCCGAA GTAATGCAAC ACAAGAGAGT CAAGTCTTCG CTGTATGGAG GCTCAGTGAC GAACTTGTCT TTTGCTGGTG CTTCCACTAC AAACTTGGTA CCTGGTCAGG GTACTAATAG AAACTCATTC TATGGCATTT CTGAGGCTAA CAACAGCGAC TATTCGGTTC TACTTGGTCA TAGTCGTGCA GGCCCCTTGT TGTCATCGCC AGGCATGCCT GCTGCTGAAG GTCCTTCTGC TCCCAGAAAG ACGATTCCTT CGATGTACCT TGAGGACTTA ATGGACAACA AGTCTACTCA TGACATGTAG
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Protein sequence | MPSLTSSTSS FTTPVMTVPA SGNNPYILRQ ENPSGTVFIA VGACVGAIFL GFILYHLIVS FTASRLAKKT MASEKQLYAT YQNNNGSAYG FGPDGSTGTT LNYNSEYQPS VAKLPLLTPS KSVLGSLGGG MGYSFGGSQL GDTSTIYQSE AAGPTTKHDM TKMFISPTAE VMQHKRVKSS SYGGSVTNLS FAGASTTNLV PGQGTNRNSF YGISEANNSD YSVLLGHSRA GPLLSSPGMP AAEGPSAPRK TIPSMYLEDL MDNKSTHDM
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