| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_31200 |
|---|
| Symbol | |
|---|
| ID | 4838636 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009044 |
|---|
| Strand | - |
|---|
| Start bp | 188491 |
|---|
| End bp | 190617 |
|---|
| Gene Length | 2127 bp |
|---|
| Protein Length | 708 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640389951 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001384335 |
|---|
| Protein GI | 150865212 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.645088 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCT ACGAGAAGAT CGTCAAGGGC GCCACCAAGA TCAAGGTGGC TGCGCCCAAG
CCCAAATACA TCGAGCCCAT TCTCATGGCC ACCTCTACCG AGCTCTCGTT AGAATCCGAC
AATTTTTCAA CAATCATGAA AACACTCCAG CATAGGCTTC AGGATCTGGC GTGGTCGGTT
GTTTATAAGG CTTTGATAGT GATCCACATA ATGATCCGCG AAGGTGACAA AGACGTCACG
CTCAAATACT TGGCCCACAA GAATCCCAAC ATGCTCTCCT TAGCCCTGGC TCCCGTAGTC
AAGAACCAGG CTGCTAACGC CGACGTCCGG TTCATCGTCA AGTACAGCAA GTATTTAGCG
ACAAGGGTCC GTCAATTCGA TACTACAGGG ATAGACTATG TTCGTGATGA ACGCTCCAAC
AACTCGACGT TGCAATCGGG AGGTAGACTC AGAACCCTCA CTGTAGAAAA GGGATTACTC
AGAGAGCTGG AGCTGGTGCA GAAACAGATA GATGCACTTT TGAAAAACAG CTTTATGGAA
AATGAAATTA ACAACGATAT CGTAGTTACA GCCTTCCGCT TACTTGTAAA TGACTTGCTT
GCACTTTTCC AGGAGCTCAA CGAAGGTGTC ATCAACATTT TGGAGCACTA CTTTGAGATG
TCGAAAATCG ACGCTGAACG GGCCCTCAAA ATCTATAAAA AGTTCGTAGA CCAGACGAAA
TATGTCATTG ATTATTTGCG GGTAGCCAAA CACCTAGAAT ACGCAACCCG TTTGCATGTT
CCTACGATCA AGCACGCTCC TACAGCCTTG ACTTCATCGC TAGAGGAATA CTTGGACGAT
CCAAACTTTG AAGCCAATAG AAAACAGTAC TTGCTGGAAA AGAAGGGAGA AACACCATTA
GAAGCAAAGC CTCAAAATTC ACAACAGCTT CAAAGCCAAC AATCCCAACA ATCCCAACAG
CAACAGCAGC CTGAGTTGCA GAGAAATAAT ACCTTGATTG TTCAGCAATC AACATACAAC
CCCTGGGGCG CAGTTATCCA ACAGCCCCAA CTTGCAAATG GCACAGGCTA CCAGATCGCA
GCATCCAATC TGATCGACGC CATGCTGCCT CAATTACAAC AGCAGAACGC TCAGCAACAA
CAGATGTTCG CTTCTGGCTT TTCTGGTATG CCTGTAATCG TTCAGGGACA GCAATTTCTG
CCGCTGCCTG TTGGCATCTC CACTGCCTTC ACAGGTGCGG GCTTTGGAGG CTATGGTCCC
CAGAATCAAA ATCAGATTCA ACATGTTCAG ATTCCACAGC AGGCAACGGG CCATAATCCA
TTTTTGCAAG GATTTTCCCA GCAGCAGCAG CCTCCTGCAG TACAGCAGCC TCTTGTAGCT
CCGCAGACTC TTGCTCTGCA GCAGCAGCCA TTCCAGCCCC AGGGGGCAGC TCAGCAGTCG
CAGACACAGC CAGATTTAAG AAGAGCAAGT ACGAATCCAT TCTCTACTTT GACTTCTTCT
GTAACTGGTC ACCAAGATGG TGGCGAGTAC TCGAATCCGT TTGCCAATTC GAGGTTTGCT
CCCAAGACCA CTACCACAGC TTTGAGCTTC AATAATGGTG TCACTACAAA TTCTGCATCT
CCTGCCGTCG ATCCAACTGC TACGGGTAGC AATCCATTCA AGGTGAGTCA AGCAACAACT
GCCTTGTTCA ACAATGCATC CAGCAAGGTT CAGCATCCAC AGCAACCTTT GAAGTCTCAA
CCAACAGCAG GAGGATTGGA GCACTTGCCT GTCATTCCTG TTTTCCCTGA AACCCAATTG
GAGAGTCAGA GAGAAAACTT CTTGACGGCT GCCAGAACTG GAATTGAAAA CCAACTCCAC
CAACAGCAAT TTCAGCAACA GCAATTTCAG CAACAGCAAC TTCAACAACA GCAGCAACTT
CAACAACAGC AGCAACTTCA ACAACAACAG CAACTTCAGC AACAGCAACA GCAACAATTT
CAACAACCAC AACAACCACA ACAGTTTCCT AATCTGTTTC AACAATCACA AACCCAGCAG
TTTCCTCAGC AGTTTTCGCA GCAGCAGTTT CCCTTTGCTC AACCACAGGT GACAGGCACG
TCGTACCAGG GAGCCAACTT GATTTAG
|
|---|
| Protein sequence | MTTYEKIVKG ATKIKVAAPK PKYIEPILMA TSTELSLESD NFSTIMKTLQ HRLQDSAWSV
VYKALIVIHI MIREGDKDVT LKYLAHKNPN MLSLASAPVV KNQAANADVR FIVKYSKYLA
TRVRQFDTTG IDYVRDERSN NSTLQSGGRL RTLTVEKGLL RESESVQKQI DALLKNSFME
NEINNDIVVT AFRLLVNDLL ALFQELNEGV INILEHYFEM SKIDAERALK IYKKFVDQTK
YVIDYLRVAK HLEYATRLHV PTIKHAPTAL TSSLEEYLDD PNFEANRKQY LSEKKGETPL
EAKPQNSQQL QSQQSQQSQQ QQQPELQRNN TLIVQQSTYN PWGAVIQQPQ LANGTGYQIA
ASNSIDAMSP QLQQQNAQQQ QMFASGFSGM PVIVQGQQFS PSPVGISTAF TGAGFGGYGP
QNQNQIQHVQ IPQQATGHNP FLQGFSQQQQ PPAVQQPLVA PQTLASQQQP FQPQGAAQQS
QTQPDLRRAS TNPFSTLTSS VTGHQDGGEY SNPFANSRFA PKTTTTALSF NNGVTTNSAS
PAVDPTATGS NPFKVSQATT ALFNNASSKV QHPQQPLKSQ PTAGGLEHLP VIPVFPETQL
ESQRENFLTA ARTGIENQLH QQQFQQQQFQ QQQLQQQQQL QQQQQLQQQQ QLQQQQQQQF
QQPQQPQQFP NSFQQSQTQQ FPQQFSQQQF PFAQPQVTGT SYQGANLI
|
|---|
| |