Gene PICST_31183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_31183 
Symbol 
ID4838579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp146587 
End bp147708 
Gene Length1122 bp 
Protein Length373 aa 
Translation table12 
GC content41% 
IMG OID640389894 
Productpredicted protein 
Protein accessionXP_001383987 
Protein GI150864959 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.698405 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.432488 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTGCC CCTTCGACGA CCTGGTCTCG TATGTTTCCA GAGATGTTTC TTCAGCGGGG 
CTCCAACTGC TCTACAGTGT AACTGAGAAC ATCAATTTCA GAGAAAGAAC TAAGGATGTT
GTTTTTCTAG AAGACAAGGA CAAGACAACC AATAGAATAA TTTCGGCTTC TCTGGCTGCT
AAAATAATTG AAATCGAAAA GTATATCGAA AACGGAACCA CTCGCTTGAT GAAGCTATGG
AAACCTTCCA GGAAACATCG AGGGACGCTT ATTCTCAGTG AAAAGAACCA AACAGGGAAT
GTTGAAACAA AAAGCGCTGT TTCTAGTTAT CATAGTGCAA CACAAACAAC TCCTGACCAA
AACACAGCTA CTCAAAGTGG GGTTTCGGAG GGCTCTGCTA AGAACAATCC ACTTCACAAT
ATATCATCTT GTAACTCAAT TACATCAAGG CATCTGAAAG AACTGAAACT TCCAGAGCGA
GCAGTTCGGT ATTTTAGATG GTTTTCAAGA TTATTGAAAA TGCCCAATTC TGAACCGCAA
CAGTCGCTGA ACTGTTCCGT GGTTTCAGAG TCTGCTTTTA TAGAATCTGC CGGTGCCCCT
ACAATACTTA CTTATGATCA TCCCTCCCTT CACAACAAGC TAGAACAATA CTTTAGAAAC
AATTCTCAAG AAAATGAAAA GGGATTTGCT CCTCTCCAGC CTGATGAAAA TATCACAAAC
ACTTCTGTTC CTGTCTTTCC TATTCTAGGG GTATGGAAGA GAAACAACCT TGATCACACT
TTGTGGCTGA GGAAAGACGA TTTTCTTATT GATGCATCTA ATTGCTTAGA CCACGGAAAT
AGAGGAAGTT CCGAGTTTGA GGATGAAGTA TTTTCTCCCC ATACCCACCG GCCCAGTTTC
AAAGACGTAA TTACTATTGA AGGAACAGAG AACCAAGATC CAGAATTGTC TTTGATAGAT
ATTGAGCAGG AGATACGGGA GAATCTTATA AGATCAAGAA GCAGGAGCAG GAGCAGAACA
ATAAACACGA CAGAAAAGGG AATTGGAAAA AAGGTGTCAA TGGGATCACT ATCTGGCTCT
CGTATTCGCT TCTTCCAGCT TGAATCGCCC ACAAACAAAT AG
 
Protein sequence
MECPFDDSVS YVSRDVSSAG LQSLYSVTEN INFRERTKDV VFLEDKDKTT NRIISASSAA 
KIIEIEKYIE NGTTRLMKLW KPSRKHRGTL ILSEKNQTGN VETKSAVSSY HSATQTTPDQ
NTATQSGVSE GSAKNNPLHN ISSCNSITSR HSKESKLPER AVRYFRWFSR LLKMPNSEPQ
QSSNCSVVSE SAFIESAGAP TILTYDHPSL HNKLEQYFRN NSQENEKGFA PLQPDENITN
TSVPVFPILG VWKRNNLDHT LWSRKDDFLI DASNCLDHGN RGSSEFEDEV FSPHTHRPSF
KDVITIEGTE NQDPELSLID IEQEIRENLI RSRSRSRSRT INTTEKGIGK KVSMGSLSGS
RIRFFQLESP TNK