Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_31183 |
Symbol | |
ID | 4838579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | + |
Start bp | 146587 |
End bp | 147708 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640389894 |
Product | predicted protein |
Protein accession | XP_001383987 |
Protein GI | 150864959 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.698405 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.432488 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGTGCC CCTTCGACGA CCTGGTCTCG TATGTTTCCA GAGATGTTTC TTCAGCGGGG CTCCAACTGC TCTACAGTGT AACTGAGAAC ATCAATTTCA GAGAAAGAAC TAAGGATGTT GTTTTTCTAG AAGACAAGGA CAAGACAACC AATAGAATAA TTTCGGCTTC TCTGGCTGCT AAAATAATTG AAATCGAAAA GTATATCGAA AACGGAACCA CTCGCTTGAT GAAGCTATGG AAACCTTCCA GGAAACATCG AGGGACGCTT ATTCTCAGTG AAAAGAACCA AACAGGGAAT GTTGAAACAA AAAGCGCTGT TTCTAGTTAT CATAGTGCAA CACAAACAAC TCCTGACCAA AACACAGCTA CTCAAAGTGG GGTTTCGGAG GGCTCTGCTA AGAACAATCC ACTTCACAAT ATATCATCTT GTAACTCAAT TACATCAAGG CATCTGAAAG AACTGAAACT TCCAGAGCGA GCAGTTCGGT ATTTTAGATG GTTTTCAAGA TTATTGAAAA TGCCCAATTC TGAACCGCAA CAGTCGCTGA ACTGTTCCGT GGTTTCAGAG TCTGCTTTTA TAGAATCTGC CGGTGCCCCT ACAATACTTA CTTATGATCA TCCCTCCCTT CACAACAAGC TAGAACAATA CTTTAGAAAC AATTCTCAAG AAAATGAAAA GGGATTTGCT CCTCTCCAGC CTGATGAAAA TATCACAAAC ACTTCTGTTC CTGTCTTTCC TATTCTAGGG GTATGGAAGA GAAACAACCT TGATCACACT TTGTGGCTGA GGAAAGACGA TTTTCTTATT GATGCATCTA ATTGCTTAGA CCACGGAAAT AGAGGAAGTT CCGAGTTTGA GGATGAAGTA TTTTCTCCCC ATACCCACCG GCCCAGTTTC AAAGACGTAA TTACTATTGA AGGAACAGAG AACCAAGATC CAGAATTGTC TTTGATAGAT ATTGAGCAGG AGATACGGGA GAATCTTATA AGATCAAGAA GCAGGAGCAG GAGCAGAACA ATAAACACGA CAGAAAAGGG AATTGGAAAA AAGGTGTCAA TGGGATCACT ATCTGGCTCT CGTATTCGCT TCTTCCAGCT TGAATCGCCC ACAAACAAAT AG
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Protein sequence | MECPFDDSVS YVSRDVSSAG LQSLYSVTEN INFRERTKDV VFLEDKDKTT NRIISASSAA KIIEIEKYIE NGTTRLMKLW KPSRKHRGTL ILSEKNQTGN VETKSAVSSY HSATQTTPDQ NTATQSGVSE GSAKNNPLHN ISSCNSITSR HSKESKLPER AVRYFRWFSR LLKMPNSEPQ QSSNCSVVSE SAFIESAGAP TILTYDHPSL HNKLEQYFRN NSQENEKGFA PLQPDENITN TSVPVFPILG VWKRNNLDHT LWSRKDDFLI DASNCLDHGN RGSSEFEDEV FSPHTHRPSF KDVITIEGTE NQDPELSLID IEQEIRENLI RSRSRSRSRT INTTEKGIGK KVSMGSLSGS RIRFFQLESP TNK
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