Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_31161 |
Symbol | |
ID | 4838600 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | + |
Start bp | 97268 |
End bp | 98262 |
Gene Length | 995 bp |
Protein Length | 301 aa |
Translation table | 12 |
GC content | 40% |
IMG OID | 640389915 |
Product | predicted protein |
Protein accession | XP_001383977 |
Protein GI | 150864951 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGAGCT CCATTGAAAA GAACTCAGAA GCTGACACGT ATGAGATGCA AACCTTGAAG ATTCTGGAGG ACTCACAAAC TTTAGATGAA GCTCTCCAAG ATCAGCATAA CGATGACTTG GAAACTGGAG GTAGCCCGTT TGAGGATACA CAGGAATCAC GAAAACAAAA ACTGGGATCA AGGAAAATAG AGTACTCTGT GTTTTTGAAC TTCTTTTTCT ATTTGATTGT GCTTGGAGGT TTGTGGTTTC TCATTGGCCA AAATTCAACA TTACGATGTA TGGCGAACGG TAATTGCGAA CCGTTATTTA CCCTTCGAAT TCTCGACTCT CCAAAAGGAG CTAATCAGAT GCTTTCTGGA ATCAGAGAAG GACTTAGAAT GTTGTCATAT GTTGCAATTG ATTTGGGGGT CAACAACAAT CTACTTAACA ATAAGAATCT CAACTATGAT CATGTCATCG ACACTTTATC CAATAGCAAC AACATCTTCA AGTTCGGATA TAATGGCTAT TGTCGGTATG ACTCGGCTAC CAAGGAACAG ATATGTTCCA AGTGTAATGG ACTCGATATC TTTTCATGTC TTGTCAAGGA TATTGGTATC CAGTTGGGTA AGGTTTCCAA CTCGAATAGC CCGGACTTGA TAGGTGAAAG CCTTTGTACG GTTTATCATG AATCAATGTC GAGCATGTTG CTATTATACG AATTTGGAAA GGCTAAGAGA CCAGGTTACG AGAACATCGA CTTGAACAAG TTAGCAATGG TGCAACAGCT TGATAAGTTG AACGGTTTGG GCAAAGTAAT CATCCATTTC AACTTCGCTC AACAGGTAGC ATCGTCGGTG TTGTTGGCGA CGCTAGGAAT GACATTTGTA TATTATCTTA TCACCAAGGA GATCTTGATG ACTAGACCCA TCAGATACCT TCATTTATTG TTTGTGATTA TTCAATCGAC TCTACTCTTA TTACTTCAAA TCTACTTCCA GGTGCTAGCC AGTAG
|
Protein sequence | MSSSIEKNSE ADTYEMQTLK ISEDSQTLDE ALQDQHNDDL ETGGSPFEDT QESRKQKSGS RKIEYSVFLN FFFYLIVLGG LWFLIGQNST LRCMANGNCE PLFTLRILDS PKGANQMLSG IREGLRMLSY VAIDLGVNNN LLNNKNLNYD HVIDTLSNSN NIFKFGYNGY CRYDSATKEQ ICSKCNGLDI FSCLVKDIGI QLGKVSNSNS PDLIGESLCT VYHESMSSML LLYEFGKAKR PGYENIDLNK LAMVQQLDKL NGLGKVIIHF NFAQQIPSFI VCDYSIDSTL ITSNLLPGAS Q
|
| |