Gene PICST_31161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_31161 
Symbol 
ID4838600 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp97268 
End bp98262 
Gene Length995 bp 
Protein Length301 aa 
Translation table12 
GC content40% 
IMG OID640389915 
Productpredicted protein 
Protein accessionXP_001383977 
Protein GI150864951 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAGCT CCATTGAAAA GAACTCAGAA GCTGACACGT ATGAGATGCA AACCTTGAAG 
ATTCTGGAGG ACTCACAAAC TTTAGATGAA GCTCTCCAAG ATCAGCATAA CGATGACTTG
GAAACTGGAG GTAGCCCGTT TGAGGATACA CAGGAATCAC GAAAACAAAA ACTGGGATCA
AGGAAAATAG AGTACTCTGT GTTTTTGAAC TTCTTTTTCT ATTTGATTGT GCTTGGAGGT
TTGTGGTTTC TCATTGGCCA AAATTCAACA TTACGATGTA TGGCGAACGG TAATTGCGAA
CCGTTATTTA CCCTTCGAAT TCTCGACTCT CCAAAAGGAG CTAATCAGAT GCTTTCTGGA
ATCAGAGAAG GACTTAGAAT GTTGTCATAT GTTGCAATTG ATTTGGGGGT CAACAACAAT
CTACTTAACA ATAAGAATCT CAACTATGAT CATGTCATCG ACACTTTATC CAATAGCAAC
AACATCTTCA AGTTCGGATA TAATGGCTAT TGTCGGTATG ACTCGGCTAC CAAGGAACAG
ATATGTTCCA AGTGTAATGG ACTCGATATC TTTTCATGTC TTGTCAAGGA TATTGGTATC
CAGTTGGGTA AGGTTTCCAA CTCGAATAGC CCGGACTTGA TAGGTGAAAG CCTTTGTACG
GTTTATCATG AATCAATGTC GAGCATGTTG CTATTATACG AATTTGGAAA GGCTAAGAGA
CCAGGTTACG AGAACATCGA CTTGAACAAG TTAGCAATGG TGCAACAGCT TGATAAGTTG
AACGGTTTGG GCAAAGTAAT CATCCATTTC AACTTCGCTC AACAGGTAGC ATCGTCGGTG
TTGTTGGCGA CGCTAGGAAT GACATTTGTA TATTATCTTA TCACCAAGGA GATCTTGATG
ACTAGACCCA TCAGATACCT TCATTTATTG TTTGTGATTA TTCAATCGAC TCTACTCTTA
TTACTTCAAA TCTACTTCCA GGTGCTAGCC AGTAG
 
Protein sequence
MSSSIEKNSE ADTYEMQTLK ISEDSQTLDE ALQDQHNDDL ETGGSPFEDT QESRKQKSGS 
RKIEYSVFLN FFFYLIVLGG LWFLIGQNST LRCMANGNCE PLFTLRILDS PKGANQMLSG
IREGLRMLSY VAIDLGVNNN LLNNKNLNYD HVIDTLSNSN NIFKFGYNGY CRYDSATKEQ
ICSKCNGLDI FSCLVKDIGI QLGKVSNSNS PDLIGESLCT VYHESMSSML LLYEFGKAKR
PGYENIDLNK LAMVQQLDKL NGLGKVIIHF NFAQQIPSFI VCDYSIDSTL ITSNLLPGAS
Q