Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_27149 |
Symbol | |
ID | 4839039 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009044 |
Strand | - |
Start bp | 128588 |
End bp | 129322 |
Gene Length | 735 bp |
Protein Length | 234 aa |
Translation table | 12 |
GC content | 44% |
IMG OID | 640390354 |
Product | conserved hypothetical protein |
Protein accession | XP_001384323 |
Protein GI | 150865202 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3703] Uncharacterized protein involved in cation transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.503803 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.389081 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GGTATGTGGG TAATTGGCTA CGGCTCGTTG ATCTTCAAAC CTCCCCACCA CTCATTCCGG GTAAATGGAT ATCTCAAGGG GTTTATAAGA CGTTTCTGGC AGAGTTCTTC TGACCATCGT GGAACCCCAG AGGCTCCGGG CAGAGTAGTT ACGCTAATTT CTTTGGACGA CTTGAAGTCC AACACAAAAT TTCACAACGA TCTCCACATG TACGAATTAA GAGCTACCCA TCAGGAGACT GAACTCAAAC ACAACCGAGA ATCTACTCCA GCCCAGATAG TCGATGTAAA CCACAAGATT AATAGCTTAC AAGTAGAGGA TTTGAAAGTG TGGGGTGTGG CATACTATGT TGAGCCACAA GATGTAGCTG AAGTAAAAGA ATATCTTGAT GTTCGTGAAC AGGATGGGTA TACCACCCAC AAGGTGCCGT TTCATATTCT CAATGTCGAG AATGAAAACG ACGTTTCTAA ACGAATCTTA GCACAACTTC CCAGAGACAC TTCTTCTGGC GACTGCATCA TCGAGCTGAT GATCTACATA GGCACTATTG ATAATGAGTC TTTCGTCGGT CCAGAAGCAA TAGAGGATAC TGCCAGTAAG ATAAGTGTGT CTAGTGGTCC TAGCGGTTTG AACTCGGAAT ACTTGTTAGA GTTGACCAAT GCTGTAAGAC ATCTAGATAA ACAAGACCGT TCCCGAGATT ACTACTTGGA GGACTTAGTG GAATTGGTTC AACGT
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Protein sequence | GMWVIGYGSL IFKPPHHSFR VNGYLKGFIR RFWQSSSDHR GTPEAPGRVV TLISLDDLKS NTKFHNDLHM YELRATHQET ELKHNRESTP AQIVDDLKVW GVAYYVEPQD VAEVKEYLDV REQDGYTTHK VPFHILNVEN ENDVSKRILA QLPRDTSSGD CIIESMIYIG TIDNESFVGP EAIEDTASKI SVSSGPSGLN SEYLLELTNA VRHLDKQDRS RDYYLEDLVE LVQR
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