Gene PICST_26415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_26415 
Symbol 
ID4838532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp1144996 
End bp1145781 
Gene Length786 bp 
Protein Length262 aa 
Translation table12 
GC content40% 
IMG OID640389847 
Productpredicted protein 
Protein accessionXP_001384519 
Protein GI150865343 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.550399 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
AAGAGGGCCA GAGTCGAATT ACCTGAAGGA ATGTCTAGAA ATCAATATAA GAAGCTCCAG 
CGTCAGAAAA AATGGGACGA GACAAAATCT GAATATCGTA AGATAAAGAA GGAAAAGAAG
AAGGCAGCTG CCAAAAGAAG AAAGGAACAA GGAATTGTGG ATGAAGAAAC AAACTACCAT
ATGGCTAGAA GGCCCAAAAC TTTGCCTAAG AATCAGATTG CTACCAATGT CCATGTGATA
ATGGATTGCG AATTTGATGA ACTTATGAAC CAGAAAGAGA TAGTTTCACT TTCAAACCAG
ATCGCACGCT CGTATTCGGC TAAGAGACAC TGTGAGTATG AAGTGAGTTT GAAGATTTCC
TCCTTTAACA AAACCTTAAA GCAGAGATTT GACAAGCTGG TGTCGCAATA CAAATTATGG
AAGAATATCG AGTTTGAAGA AAACGACAAA TTGGCTGATA TCTTGCCTAT TGATTCGCCG
GAAGAGTTAA GTAAGTATGT TTACTTAACG GCAGACACAG ACGAAGTGAT CAACGATTTG
GAGCCTGATC ACACATACAT CATTGGAGGA ATAGTAGACA AAAACAGACA CAAGTTATTG
TGTGTGAACA AAGCCAAGGA ACTTGGGTTG AGAGTTGGGA AGTTGCCAAT TGACAAATAC
ATCGAGATGA ATGGTCGTCA AGTGTTGGCT ACGTCGCATG TCTACGAATT ATGTTGCAAG
TGGTTTGAAA CCGGTAAAGA CTGGGGGAAA GCGTTTAATG AAGTTCTTCC ACCTAGAAAG
GTCAAG
 
Protein sequence
KRARVELPEG MSRNQYKKLQ RQKKWDETKS EYRKIKKEKK KAAAKRRKEQ GIVDEETNYH 
MARRPKTLPK NQIATNVHVI MDCEFDELMN QKEIVSLSNQ IARSYSAKRH CEYEVSLKIS
SFNKTLKQRF DKSVSQYKLW KNIEFEENDK LADILPIDSP EELSKYVYLT ADTDEVINDL
EPDHTYIIGG IVDKNRHKLL CVNKAKELGL RVGKLPIDKY IEMNGRQVLA TSHVYELCCK
WFETGKDWGK AFNEVLPPRK VK