Gene PICST_22536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_22536 
Symbol 
ID4838718 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009044 
Strand
Start bp1190015 
End bp1190473 
Gene Length459 bp 
Protein Length144 aa 
Translation table12 
GC content47% 
IMG OID640390033 
Productpredicted protein 
Protein accessionXP_001384181 
Protein GI126135314 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.272447 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAT ACAACTCCAA CACTGTTGCC CAGTTGAAAG ACTTGTTAAA AGAAAGAGGC 
TTAACCACCG ACGGAAAGAA GGCTGACTTG GTCAACCGTT TAATTGAAGC TGATTCCACC
AAACAGGAAG AGCCTGAAGT AGCTGAAGCC GAGCCTGAAG CTGTAGTGGC GCCAATTGCT
GCTGAAAACG AAGCTACTGA AGTCATCGCT GAAGATTCGG CACCTGTTGC TGACGAAGAT
GCAACATTGA CTGTTGTCCA ACCTGTTACT AAGGAAGAGC CAAAGGTGTT GTCTGCTGAA
GAAAGGAAGC AATTAGCCAT CGAGTTGTTG AACAAAAAGG TGCAGAGAGC TGTGAAATTC
GGTGATGAAA GTGCAGCAGA AGCTGCCAGA AAAGACTTGG TCAGAGTCGA GAAGTTTGGT
GTGGAACTCG GCACTGCCTT GGCCAGAGAA ATCGGACTT
 
Protein sequence
MSEYNSNTVA QLKDLLKERG LTTDGKKADL VNRLIEADST KQEEPEVAEA EPEAVVAPIA 
AENEATEVIA EDSAPVADED ATLTPKVLSA EERKQLAIEL LNKKVQRAVK FGDESAAEAA
RKDLVRVEKF GVELGTALAR EIGL